Rhodobacteraceae bacterium SC52: G5B39_15550
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Entry
G5B39_15550 CDS
T06457
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
faq
Rhodobacteraceae bacterium SC52
Brite
KEGG Orthology (KO) [BR:
faq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
faq03400
]
G5B39_15550
DNA repair and recombination proteins [BR:
faq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
G5B39_15550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_10
AAA_22
ResIII
AAA
AAA_30
FtsK_SpoIIIE
DUF4192
T2SSE
TrwB_AAD_bind
AAA_7
AAA_16
nSTAND3
CbiA
AAA_19
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
QIE43441
UniProt:
A0A6G6FCZ8
LinkDB
All DBs
Position
pSC52_2:200432..201955
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AA seq
507 aa
AA seq
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MDKSGIFIGGGGAEQDTAQVLHLDLANRHGLVTGATGTGKTVTMQILAEGFSAAGVPVFM
ADVKGDVSGLSQAGTPKDFLFSRAEKIALTDYELKAFPVVLWDLFGADGHPVRTTITDIG
PLLLSQMLDLTEVQEGVLTIAFAVADDEDLALLDLEDLRAMLVWLDENAPDIKARYGNVS
SASIGAIQRALLVLENEGAAGFLGEPALDLADMMATDGGLGRINVLMANKLMSSPRLYAM
FLLWLLSELFETLPEIGNPDKPVLVFFFDEAHLLFDTAPKALIDRIEQVVRLIRSKGVGV
YFVTQNPDDVPPDVLSQLGNRIQHALRAFTPRDAKALRLASETFRPNPDFDTEEAIRSVG
TGEAVTSMLEKKAVPGIAQRTLIRPPCSRMGPLTKPERAAVIAASPLAGKYEAAINRESA
QEKLAARAEAAAVETRRAEEAAQETKDAFAEFNKARRYKPPMPKRTQSKRRGPSLTDALA
KTVVKQLNSREGQKLVRGILGSLFRSR
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtccgggattttcattggcggcggcggagctgagcaggacacagcgcaagtt
ctgcacctcgatctggcgaaccggcacgggctggtaaccggggcaaccggaaccggcaag
acagtcaccatgcagatccttgccgaagggttttcggccgcaggcgtcccagtgttcatg
gccgatgtgaagggggacgtttcgggtctctcacaggcggggacgccaaaagactttttg
ttttcccgcgctgaaaaaatcgccctgactgactatgagttgaaggcattccccgtagtg
ctttgggatctcttcggcgcggatgggcaccctgtgcgcacgacgattacggatattggc
ccgcttttgctatcccagatgcttgacctgacagaggtccaggaaggggttctgacaatc
gcctttgccgttgccgacgacgaagatctcgcgcttctggatttggaagatctgcgtgcc
atgctggtctggctggacgaaaacgcgcccgacatcaaggcgcggtacggcaacgtatct
tctgcctctattggcgcgatccaacgggcgcttttggtgctggaaaacgaaggcgccgca
gggtttctgggcgagccggcgcttgatcttgcagacatgatggccaccgatggcggtttg
ggccgcatcaacgtgttaatggcgaacaagctgatgtcgtcgcctcggctttacgccatg
ttcttgttgtggctgttgtctgaactcttcgaaacgctgcccgaaattggaaacccggac
aaaccagtgttggtgttcttcttcgacgaggcacatttgctgttcgataccgccccaaag
gctttgatagataggatcgaacaggttgttcggctcatccggtccaagggtgtcggggtc
tatttcgtcacacaaaatccagacgacgtgccgcccgatgtgctgagccagttgggcaat
cgcatccagcatgcgcttcgggcatttacgccccgcgatgccaaggcgcttaggctggcg
tccgaaaccttccgccccaatcctgattttgacacggaagaggccattcgcagcgttggc
actggcgaagcggtcacctcaatgctggaaaagaaagctgtgccggggatcgcacagcgc
accttgatccggccgccctgttcgcgaatgggaccgttgaccaagccagagcgcgcggcg
gtgatcgcggcctcgccgttggccggcaaatatgaggcggcaatcaaccgcgagagtgcc
caagagaaattggcggcccgcgccgaagccgcagccgttgaaacgcgccgcgcagaggaa
gccgcacaagagacgaaagatgcctttgcagagtttaacaaagcgcgtcggtacaaaccc
ccgatgccgaagcgtacccagtcaaaacggcgcggcccaagtttgaccgatgcgctggcc
aagaccgtggtcaagcaactcaactcccgagaagggcagaaactggtgcgcggtatcttg
ggcagtctgtttcgaagtcgatag
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