Rhodobacteraceae bacterium SC52: G5B39_16125
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Entry
G5B39_16125 CDS
T06457
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
faq
Rhodobacteraceae bacterium SC52
Brite
KEGG Orthology (KO) [BR:
faq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
faq03400
]
G5B39_16125
DNA repair and recombination proteins [BR:
faq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
G5B39_16125
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GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QIE43542
UniProt:
A0A858CR75
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All DBs
Position
pSC52_2:328445..330130
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AA seq
561 aa
AA seq
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MIWKFWPTYLLQQEIGEGALRDVEEILPLVDTGGGSLFFDSTKASLVKLIAATAPEDYFK
NRENLSKCLNFLSPDAFDGLQDALGLKKRELSPKAISSIVKCIGASSENYHTFCQLFDIP
TRFQIETSKKPPSKITISGPTKTCPVEIFKPYKVLKHYQADIFHRATRELEAPMSRLILQ
MPTGSGKTRTAMEVIAEHFRSAVTPNSNKPRRVIWLANSKELCEQSIACFAEVWEHVGTH
EVEVHRVWGGHNALKQTNFDGEYQFLVASFQTLWPLLESADQEFLEIFEQTTLLVVDEAH
IAVADTYAKTIREITRVSHCKILGLTATPGRTNESEVGVLADLFQNKMVGLRDPSNVWEN
SIKYLRSIDVLSTVEYEPLIVDSDVGFTKKEVEALVSQFEYSESILKKIGGSKARSAEIL
SRLSVDLSTGSSIILFAPSLENSKFLASMLIFLGYDAAHVDGATSPASRDYFISKFLQKD
VQVLCNYGVLTTGFDAPKTDVVCIARPTKSPVLYSQMIGRGLRGPAVGGTKNCKIIEVRD
NFMNQGTQDDLYEYFDDYWIG
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgatttggaaattttggcccacataccttctccaacaagaaattggagaaggggcttta
cgcgatgtcgaagaaattttgccgttggtcgatacaggtggtggatctttgttcttcgac
tcgactaaagcaagtttggtgaaactaatcgctgcgacagcacccgaagactatttcaaa
aacagggaaaacctgagtaagtgcctaaatttcttatccccagatgcttttgatggcttg
caagacgctcttggcctcaagaagagagagctatctccgaaagctattagctcaatcgtc
aaatgtattggcgcctcaagcgaaaactatcataccttctgtcaactgttcgacataccg
actcgttttcaaattgagacatcaaaaaagccaccttcaaagatcaccatttccggtccg
acaaaaacttgtccggtagaaatatttaagccgtacaaggtactaaaacattatcaggca
gatattttccatcgcgcgacacgtgaattggaagccccaatgtctcggttgatactacaa
atgccaacgggttccggcaaaacaagaaccgcaatggaggtgattgcagaacacttcaga
tcagccgtaactccaaactctaacaaaccaagacgggtgatttggctggccaactcaaag
gaactctgtgaacagtcgattgcatgttttgcggaagtttgggaacacgtgggaactcac
gaagtcgaagtgcaccgggtttggggtggtcacaacgctttaaagcagaccaatttcgac
ggcgaatatcagttccttgttgctagtttccagactctatggccgttgttggagagtgct
gatcaagagtttcttgaaatttttgaacaaaccacactgttggttgttgatgaagcccat
attgcagtggcagacacgtacgccaagacaatacgggaaattacccgcgtttcccactgt
aagatcctcgggttgactgcaacgccaggcagaacgaacgaaagcgaggttggggttctt
gccgatctatttcaaaataagatggtcggacttcgtgatccaagtaatgtttgggagaat
tcgatcaaatacctacggtcgatcgatgtgctttcaacggtagaatatgagccattgata
gtagactccgacgttggcttcactaagaaggaagttgaagctctcgtcagtcaatttgag
tattcagaaagtatcctgaagaagattggcggctccaaggctagaagcgcggaaatcctg
tcacgtctaagcgtggatttaagtacaggttccagcatcatactttttgcgccaagcctc
gaaaacagcaagttcctagcgtcgatgttgatttttcttgggtatgatgcagcacatgtt
gacggtgctacgtccccagcaagcagagattacttcatatcaaagtttttgcagaaagac
gttcaagttttgtgcaattatggcgtgttaactactgggttcgatgcaccaaaaactgat
gtagtatgcatcgctagaccaaccaaatcacctgttctttacagtcaaatgataggtcgc
ggactgcggggaccagccgtcggcggcacgaaaaattgtaagattattgaagttcgtgac
aactttatgaaccagggtacacaggatgatttgtacgagtattttgacgactattggatt
ggttaa
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