Fictibacillus arsenicus: ABE41_001790
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Entry
ABE41_001790 CDS
T04452
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
far
Fictibacillus arsenicus
Pathway
far03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
far00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABE41_001790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
far03019
]
ABE41_001790
03400 DNA repair and recombination proteins [BR:
far03400
]
ABE41_001790
Enzymes [BR:
far01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABE41_001790
Messenger RNA biogenesis [BR:
far03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABE41_001790
DNA repair and recombination proteins [BR:
far03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ABE41_001790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
HTH_40
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Sigma70_r4_2
HTH_5
Fe-ADH
Motif
Other DBs
NCBI-ProteinID:
ANX10745
UniProt:
A0A1B1Z020
LinkDB
All DBs
Position
309241..311367
Genome browser
AA seq
708 aa
AA seq
DB search
MLELHYGYSSFRNGQEQAIQSVLAGEDTLCVMPTGGGKSICYQIPALVFEGTTIVISPLI
SLMKDQVDTLLQLGISAAFINSSITAAETRDRIEKAKRGEYKLLYIAPERLESYDFMDHL
RQIDIPLVAVDEAHCISQWGHDFRPSYQRIQRMIGNLPKRPVVLALTATATPRVRQDICW
SLDIDENKTVLTGFERENLSFSVIKGQDRLSFLKDFIKKNEKEAGIIYAATRKTVDQLYE
HLKKSGIHVSRYHAGMNDHERMEQQEQFLQDESSVMVATSAFGMGIDKSNIRYVIHFQLP
KNMESYYQEAGRAGRDGLPSECILLYSSQDVQVQRFLIDQSSESDRISQELEKLQLMVDY
CHTESCLQKMIVRYFSDEEIPPCGRCGNCTDSRESIEVTREAQIVLSCIVRMGQKRFGKT
IIAQVLTGSKNKKVQELKFQKLPTYGMMKEKSIKEVTDFIEFFISQELIAVEHGSFPTLY
IKEKGKDVLLGKETVMRKEAVQTKQVSNDDPLFEELRMVRKAIAEKENVPPFVIFADTAL
KDMCVKLPETKEEFLTVTGVGQNKLEKYGEQFIEAILEFLVQNPERKENAVKGSVPGTDP
NKKKATPNSHLETYTFYKEEMSVEEIAEHRDLAVSTVESHLIQCMQEGMDVHMEDLIPDE
YIAEIENAIQQAGGEKLKPIKELLPDEVSYFMIKVFLLQNENGKRVTL
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgctagagttgcattacggttattcttcattccggaatggacaagagcaagcgatacaa
tcggttttagcaggtgaagatactctttgtgtcatgccgacaggcggaggtaaatcgatc
tgctatcagattcctgcccttgtttttgaaggaacaacgattgttatttctcctttaatt
tcattgatgaaagatcaggttgatacattattgcagttaggaatttccgcagccttcatt
aatagttcgataacagcggcagaaacgagagatcgaatcgaaaaggcaaagcgcggagaa
tataaacttctatatattgcaccagaaagactagaatcctatgactttatggatcattta
agacaaatcgatattcctttagtggcagtagacgaggctcattgtatctcgcaatggggt
catgatttccggccgagctatcagcgtattcagagaatgatagggaacttgccgaagcgt
cctgttgtgctcgcgctaacggcaactgctacaccaagagttcgtcaggatatttgctgg
tcgcttgatatcgatgaaaacaaaaccgttttaacaggatttgagcgggagaatctttct
ttctcagtgattaaagggcaagatcgtctctcttttctaaaagattttattaaaaagaac
gaaaaagaagcgggaatcatttatgcggctacacgaaagactgtcgatcagctgtatgag
cacctgaaaaagagcggtatccatgtttcgcgctaccatgccgggatgaacgaccacgaa
agaatggagcaacaggagcaatttctgcaagatgaatcttctgtaatggttgcaacatct
gcgtttggtatggggatcgataagtcgaacatccgatacgtcattcattttcagctgccg
aaaaatatggaaagctattatcaggaagcaggccgtgctggccgagacggattaccgagt
gaatgtattcttctttattcgtctcaggacgttcaagttcagcggttcttgatcgatcag
tcaagtgaatctgaccgcatttcgcaggaacttgaaaaactgcagcttatggtggattac
tgtcatacagaaagctgtctgcaaaaaatgatagtgcgctacttcagtgacgaagaaata
ccgccatgcggacgctgcggcaattgtacggattcacgggaaagcattgaggtaacaagg
gaagctcaaatcgttctttcctgtatcgtgcgaatggggcagaaaagattcggtaaaaca
atcatcgcccaggtgctgacaggatccaaaaataaaaaagtgcaggagctgaaatttcag
aagctgccaacatacggcatgatgaaagaaaaaagcataaaagaagtcaccgactttatt
gaattctttatctcacaagaactgattgcggtagagcatggctcttttccgactctttac
ataaaagaaaaaggaaaagatgttctgttaggaaaagaaaccgtgatgcgaaaagaagca
gttcagacaaagcaggtttcaaacgacgatccattgttcgaagaacttcgaatggtccga
aaggccatcgcagaaaaagaaaacgtaccgccgtttgttatttttgctgatacggcgctg
aaagatatgtgcgtaaagctgcctgaaacaaaagaagagtttttaacagtcacaggagtt
ggtcaaaataaactagagaagtatggtgaacagtttatcgaggcaattctggagttttta
gtacaaaaccccgaacgcaaggagaatgcagtgaaggggtctgtcccggggacagacccc
aataagaaaaaagcgacaccaaattctcaccttgaaacatacacgttttataaagaggaa
atgtctgttgaagaaatagcagaacatcgtgatctggcagtgagtacagtggaaagccac
cttattcaatgcatgcaggaagggatggacgttcatatggaagacctcattccagatgaa
tatatcgctgagatcgaaaacgccatccagcaggctggcggagaaaagttaaagccgatc
aaagaattgcttcctgatgaagtaagctattttatgattaaagtgtttttgcttcaaaat
gagaatgggaaacgggtgacattatga
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