Fictibacillus arsenicus: ABE41_008870
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Entry
ABE41_008870 CDS
T04452
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
far
Fictibacillus arsenicus
Pathway
far03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
far00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABE41_008870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
far03019
]
ABE41_008870
Messenger RNA biogenesis [BR:
far03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ABE41_008870
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
DUF4453
Motif
Other DBs
NCBI-ProteinID:
ANX12117
UniProt:
A0A1B1Z3P7
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All DBs
Position
complement(1687366..1689036)
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AA seq
556 aa
AA seq
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MKFVKNHQAAVFALGGLGEIGKNTYAVQFQDEIILIDAGIKFPEDELLGIDYVIPDYTYL
VKNEEKIKGLFITHGHEDHIGGIPYLLRQVNIPIYGGKLALALIKNKLEEHGLLRSAQLH
EITEDDVIKFRKTSLSFFRTTHSIPDAYGIVVKTPPGNIVHTGDFKFDFTPVGEPANITK
MAEIGKEGVLCLLSDSTNSEVPGFTLSERRVGESIQDIFRKMEGRVIFATFASNIHRLQQ
VVEASVANNRKIAVFGRSMDSAITVGQELGFIKAPKNTFVDANQINRLPDNQVTILCTGS
QGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNALSVSKTINQLYRAGAEVIHGSL
NDIHTSGHGGQQEQKLMLRLMKPKYFLPIHGEYRMLKMHTKLAADCDVPLQNSFIMDNGE
VLALSQNDAMIAGKIPSGSVYVDGSGIGDIGNIVLRDRKILSEEGLVVVVVSMDMKEFTI
EAGPDIISRGFVYMRESGDLIHDAQSLLSKHLQNIMSEKRTTQWSEIKNEITDTLAPFLY
EKTKRRPMILPIIMEI
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtaaaaaatcatcaagccgccgttttcgccctcggtggtttaggggaaatc
ggcaaaaatacgtatgccgttcaatttcaggatgaaatcatccttatcgatgcaggaatt
aaatttcctgaagatgaattgctggggattgattacgtaatccctgattacacctatctt
gtaaaaaatgaggaaaaaatcaaaggactcttcatcactcacggacatgaagatcatatt
ggcggaattccctatttattaagacaagtcaatataccgatctacggcggtaaacttgca
cttgctcttattaaaaacaaattagaagaacatggtctgctccgcagtgcacagctgcat
gagatcacagaagatgatgtgattaagttcagaaaaacgtctctcagctttttcagaaca
actcacagtatacctgacgcttacggaatcgtagttaagacacctccaggaaatatcgtg
catacgggtgacttcaaattcgattttacaccagttggtgaacctgcgaacattacgaaa
atggctgagatcggtaaagaaggcgtgctttgcttgctttccgacagcactaacagcgaa
gttcctggttttacattatctgaaagacgtgttggtgagagcatccaagatatcttcaga
aaaatggaaggacgagttattttcgctacgttcgcttctaatattcatagacttcagcaa
gttgtggaagcttcagtagccaacaaccgtaaaatcgcagtttttggacgaagcatggac
tcagcgattacagttgggcaagaacttggtttcataaaagcacctaagaacacattcgtt
gacgcaaaccagataaaccgtcttcctgacaatcaggtaacgattctttgtacaggaagc
cagggagagccaatggcggcactttcaagaattgctaacggtactcaccgccagattcaa
atcattcctggagatacagttgtgttttcatcttcacctattccagggaacgctcttagt
gtaagtaagacaatcaatcaattatatcgcgcgggtgctgaagttattcatggctcgcta
aatgatattcacacttcaggtcatggcggccagcaagaacaaaaattgatgcttcgttta
atgaagcctaaatacttccttccgatccatggcgagtacagaatgctgaaaatgcatact
aaacttgctgctgattgtgacgtaccgctgcaaaattcatttattatggataacggcgaa
gtattagctctttctcaaaacgatgctatgatcgcaggaaaaatcccgtctggctctgta
tatgtagacggaagcggtattggcgatattggaaacatcgtactccgcgaccgtaagatt
ctttcagaagaaggtcttgtagttgtcgttgtaagtatggatatgaaggaattcacgata
gaagcaggtccagacatcatctctcgcggatttgtatatatgcgtgaatccggtgatctt
atccatgatgcacaaagcttattaagcaagcatctacagaacatcatgagcgaaaaacga
acgactcaatggtctgaaatcaaaaatgaaattacagatacattagcaccattcctatat
gagaaaacaaaaagacgccctatgatcctgccgatcattatggaaatctaa
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