Fictibacillus arsenicus: ABE41_012010
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Entry
ABE41_012010 CDS
T04452
Name
(GenBank) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
far
Fictibacillus arsenicus
Pathway
far03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
far00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABE41_012010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
far03019
]
ABE41_012010
03400 DNA repair and recombination proteins [BR:
far03400
]
ABE41_012010
Enzymes [BR:
far01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABE41_012010
Messenger RNA biogenesis [BR:
far03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABE41_012010
DNA repair and recombination proteins [BR:
far03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ABE41_012010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
SNF2-rel_dom
Rhodanese
START_2
Cas3-like_C_2
HpaB
Motif
Other DBs
NCBI-ProteinID:
ANX12736
UniProt:
A0A1B1Z5U4
LinkDB
All DBs
Position
complement(2329257..2330750)
Genome browser
AA seq
497 aa
AA seq
DB search
MQLETALKQYYGFNNFRPGQKEIVEDILSGHDVLGMLPTGTGKTLIYQLGAVLLKGRALI
VSPLVSLMQDQVDQFKQAGFKRTVALNSFLDHSDKRSVLHHLKDYQFVFVSPEILQNKYV
RSALLSIDWSLFVVDEAHCISQWGHEFRPHYLDLAIIKKELGNPVCLALTATATVKVQED
IRNYLEMRDAKVHIHSMNRPNISIFVESFSQIEKKQDRAIDLINDLQGPGILYTNTRKGA
EQLVSVLHERGMQDVSYYHGGMEQDERLLVQKQFLNSQLQLIVCTNAFGMGINKPDIRYV
IHYHAPANVEGYVQEIGRAGRDMQPSAAILLYHPSDLEVPFHFIEHELPDDNQIDYILSD
YEALAEHTLFERLQLAGISETGQRFMEYHLNNAGVLFEKCVPEEKRELLKKILKKKIEER
KREKLKSLRMIEKWIMDEGCKRNMLLKYFGEEEIAAMDECCSGCQGELVRFYGKQEKEIN
TYHEWEDELKRLFRQEV
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgcagttggaaacggcacttaaacagtattacggatttaataatttcagaccgggacaa
aaagaaatagtagaagatattctttcaggtcatgatgtactaggcatgcttcctactggg
acggggaaaacactgatctatcaattgggagccgttttattgaaaggaagagctttaatc
gtttctccgttagtatctcttatgcaggaccaagttgatcaattcaaacaggctggcttt
aagagaacggtggcgttaaacagtttcttagatcattcagataaacgatcggttttgcat
cacttaaaagattaccagtttgtctttgtaagccctgagatcttgcagaataaatatgta
cgatctgctttactatcgatcgactggtcgctctttgtagtagatgaagcacattgtatt
tcacaatggggacatgaatttcgcccgcattatttggatttagcaattattaagaaagag
ctcggaaaccctgtatgtcttgcattaacagcaacagctacagtaaaagtgcaagaagac
attcggaattatttagaaatgagagatgcgaaagttcatatacatagtatgaatcggcca
aatatctctatttttgttgagtccttttctcaaatagagaaaaaacaagacagagcaatt
gatttaataaatgatttacaaggtccgggaattctttatacaaatacgagaaaaggtgct
gaacagcttgtctctgttcttcatgaaagggggatgcaagatgtatcctattatcatgga
ggtatggaacaggatgagagactgctagttcaaaagcaattccttaattcgcagctgcag
ctgatcgtatgcacaaatgcatttggaatgggcataaataagcctgatatcaggtatgta
attcattatcatgcaccagcaaatgtagaaggatatgttcaggaaattggacgtgccgga
cgggatatgcagccgtcagcagcgattcttctttatcatccatctgatttagaggttcca
tttcactttattgaacatgagctgcctgatgataatcaaatagattacattttatcggat
tatgaagcacttgccgaacataccttatttgagcgtttgcagttagctggtatatctgaa
actggccaaagatttatggaataccacctaaacaatgcaggagtactttttgaaaagtgt
gttccagaagagaaaagggaattattgaaaaaaatacttaagaaaaaaatagaggaaaga
aaaagagaaaagttaaaatccttaagaatgattgaaaagtggattatggatgaaggctgt
aaacgaaatatgctgctgaaatatttcggtgaagaagaaatagcagccatggatgaatgc
tgcagcggctgtcaaggtgaactggtccgtttttacggaaaacaagaaaaagaaataaat
acttatcacgaatgggaagatgaacttaaacggttatttagacaggaagtgtaa
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