Fopius arisanus: 105263117
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Entry
105263117 CDS
T07645
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
fas
Fopius arisanus
Pathway
fas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105263117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fas03041
]
105263117
Enzymes [BR:
fas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105263117
Spliceosome [BR:
fas03041
]
Complex A
U2 snRNP components
U2 related factors
105263117
Complex B
105263117
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
105263117
NCBI-ProteinID:
XP_011297417
UniProt:
A0A9R1TVF0
LinkDB
All DBs
Position
Unknown
AA seq
1023 aa
AA seq
DB search
MVRSGDKERHHRRRSRSRSRSRSPSPEKKRKRSRSRDRDREREKSTRHRDRRSRSRDRET
RRDRSERDRDRDRKRGDSKEKRVESSKSSRGKDRKRSRSRDKKDKEKVDNEDLPFDHTKL
DKEEEQKRLELEMQKRRERIERWRAERKKNELEATKKDGKSSILANLQLPMKKWSLEDDS
DEETPLPVPPKDPKDEDEAKEEEEVTEMGKPEEDEIDPLDAFMAEVQEEVRKVNKFEKGK
SNTNGAAGNSQSGGVVFVTGVAKKKVQKQKGELIEQNQDGLEYSSEEEGENLHETAAGIA
NKQKRELAKVDHATTEYAPFRKSFYVEVPEIARMTPEEVEAYKEELEGIRVKGKGCPKPI
KSWAQCGVTKKELEVLKKLGYEKPTPIQCQAISAIMSGRDLIGIAKTGSGKTLAFLLPMF
RHILDQPPLADGDGPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTGISEQIAE
LKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIMENVR
PDRQTVLFSATFPRQMEALARRILTRPVEVQVGGRSVVCKDVEQHVVVLEEDQKFYKLLE
ILGHYQDKGSTIIFVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTMIDFKAGRTK
ILVATSVAARGLDVKQLVLVINYDCPNHYEDYVHRCGRTGRAGNKGYAYTFITTEQERYA
GEIVRAYELAGVPVPEPLRILWDRYRAKQAAEGKKLHTGGGFSGKGFKFDESEAALANEK
KKFQKAALGLQDSDDEDIENDIDQQIESMLAPKRTVREIARPSTNSVSVPGQPVSSATDK
LELARRLASKINIAKNLGAEAKGATQQAAEAILKGAGPTNLITAKTVAEQLAAKLNTKLN
YQPREEDLIEGEGEPGEQTFRKYEEELEINDFPQQARWRVTSKEALAQISEYSEAGLTVR
GTYIATGKAPPEGERKLYLAIESTSELAVSKAKAEVSRLIKEELIKLQSSGAHTGSRGRY
KVL
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggtgcggagtggagacaaagaaagacatcacagaaggcgttcaaggtctcgttctcgt
tcacgttcaccatcgccggagaaaaaacgaaaacgatcgcgaagtagagatcgtgatcgc
gaacgtgaaaaatcgactcgtcaccgagatcgacggagtcgttccagggatcgagaaacg
cggagagatcgatcagagcgagatcgagatcgagatcggaaacgaggtgacagtaaagaa
aaacgcgtagaatcctcgaaatcctcccgaggaaaagaccggaaacgttctcgatcgcgt
gataaaaaagacaaagagaaagttgataacgaggacttgccattcgaccacacaaaactc
gataaagaggaggagcaaaaacgcctagagctggaaatgcaaaagcgacgagagagaatc
gagagatggcgtgcagagcgcaagaagaatgagctagaggcgacgaaaaaagatgggaag
tcctcgattctcgctaatctccaactaccgatgaagaagtggtcgctggaagacgacagc
gacgaagagacaccacttccggtccctccgaaggacccgaaggacgaggacgaagctaaa
gaggaagaagaagtaacggaaatgggaaaacccgaagaggacgagatcgatccactggac
gctttcatggctgaggtgcaagaagaggtccgcaaggtcaataaattcgagaaaggtaag
tcaaataccaacggcgctgccggcaattcccagagtggtggtgtagtatttgtaactggc
gttgccaagaagaaggtccagaagcaaaagggcgagttgattgagcagaatcaagacggt
ctggagtattccagcgaggaagagggggagaacctccacgagacagctgcgggaatcgcg
aacaaacagaaacgggaacttgctaaagtagatcacgcgacaaccgaatacgcccccttc
cggaaatccttttacgttgaagttccggagatcgcgagaatgacaccagaagaggttgag
gcgtacaaagaggaactcgaggggatcagggttaagggcaagggctgccccaagccgata
aagtcctgggcgcaatgcggcgtgacgaagaaagagctcgaggtccttaaaaaattggga
tacgaaaaaccaacgccgatacagtgtcaagcgatatccgcgataatgtccggtcgggat
ttgattggaatcgcaaagacaggtagtggaaagacactcgcctttctgttgccgatgttc
aggcatattttggatcagccaccgttggccgatggcgacggtcctattgccctcattatg
acacccactagagaactttgcatgcagatcggcagggactcaaagaagtttacaaagtct
ctaggattgagtcacgtctgtgtgtacggaggcaccggaatttccgaacaaatcgcagaa
ctcaaacgcggcgctgaaatcatcgtctgcacacccggtaggatgattgatatgcttgca
gccaattcgggaagagtcaccaatttacgtagagtcacttacgtagttcttgatgaagct
gatcgaatgtttgacatgggatttgagccccaggtgatgaggatcatggagaatgttcga
ccggatagacagactgttctgttctcggcgacgtttcctcgacagatggaggcactggct
cggagaattctcacgagaccggttgaggttcaggttggagggagatcggttgtgtgcaag
gatgtggagcagcatgtggtggttctggaggaggaccagaagttctacaagctgttggag
attctggggcattaccaggacaagggctcgaccattatctttgttgacaagcaggaaaac
gcagatacgttgctgaaggatttgatgaaggcatcctactcctgcatgtcgctccatggg
gggattgaccagtgcgacagagactcgacgatgatcgatttcaaggcaggccggacgaag
attctggtggctacgtcggtcgctgccaggggtttggacgtcaagcagctcgtgcttgtc
attaattatgattgtccgaatcattacgaggattatgtgcatcgctgcggaagaacggga
cgggctgggaacaaggggtacgcttacaccttcatcacgacggaacaggaacgttacgca
ggagaaatcgtcagggcttatgaactcgctggggtgcctgttccggaacctctgaggatt
ctctgggacaggtacagagccaaacaagccgctgagggaaagaaactacacaccggtgga
ggattcagtggaaagggcttcaagttcgatgaatctgaggcagcacttgcgaatgagaaa
aagaagtttcaaaaggctgcgttgggactccaggattccgatgatgaggatattgagaat
gatattgaccagcagattgagagtatgctggcgcccaagagaactgtcagagagatcgct
agaccttctaccaatagtgtcagtgttcctggacaaccggtgagcagtgccactgataag
ttggagttggcgagaaggcttgcgtccaagattaatattgccaagaatctgggggctgag
gccaagggcgcaacgcaacaagctgctgaggctatacttaagggcgcaggacctaccaat
ttaattactgcgaaaaccgtggcggaacaactggcagccaaactcaacacaaaattaaac
tatcaacctagggaagaggacttgatcgagggtgagggtgagcctggtgagcaaaccttc
agaaaatacgaggaggaattggagatcaatgatttcccacaacaagcaaggtggagagta
acgagtaaagaggctttagcacaaatttctgaatactcagaggccggcctgacagtcaga
ggtacttatattgccacaggcaaagctccacctgaaggtgaacgaaaattatacctcgcc
atcgaatcaacaagcgaattagctgtcagtaaagccaaagccgaggtatcaaggctaatc
aaagaggaactcattaaattacagtcctctggggcacacacaggctctcggggtcgttac
aaagttctgtaa
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