Fopius arisanus: 105263665
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Entry
105263665 CDS
T07645
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
fas
Fopius arisanus
Pathway
fas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105263665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fas03019
]
105263665
Messenger RNA biogenesis [BR:
fas03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
105263665
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
CSD2
Rrp44_S1
Motif
Other DBs
NCBI-GeneID:
105263665
NCBI-ProteinID:
XP_011298315
UniProt:
A0A9R1SW87
LinkDB
All DBs
Position
Unknown
AA seq
969 aa
AA seq
DB search
MLTTKTFFRKTKSGNIFKITRDHYLRDDIWCGSEICDNCSPKLSGKILDESPGATSSLIN
TPYYLLLDTNIVLDQIHILEEELICNVVILQTVLEEVRHRSSNVYKSLADIISNPNRKFY
VFVNEHRRETYVERIRGESANDRNDRAIREATKWYNSHLEGIKTVLLTDDNDNKEKARRE
GLLAFTMEEYVESLDNGGVLVDKLSKRQFVLEGKGEPLFPCHLTPAEIHKGITSGKLLQG
SFLASRENFLEGTVNVEGMDKFVLVQGRVGLNRAVDGDVVALELLPKDQWTAPSDIVLQD
EEEEDPGDVIDEEEIVQKPTKEVERTPTGKIVGIIRRKWRQYCGILQPNAVKENVRHLFV
PAERKIPKVRIETRQAEALYSQRIIVAIDSWPRNSRYPLGHFVRALGNVGDKETENEVLL
LEHDVPHSRFSDEVLSFLPKLPWVITESDVAQREDFRHIDVCSVDPPGCTDIDDALHCKE
LDNGNLEVAVHIADVSHFIRPGTALDKEAASRATTVYLVDKRIDMVPELLSSNLCSLRGN
EERFAFSCLWEMDHSANIINTRFCKSIIRSRAAMTYEEAQLKIDDPSQTDAIAKSLRGLN
TLAKKLKKRRLENGALVLASPEIRFQVDSETHDPIEVEAKKMRETNSMVEEFMLLANISV
AKKIVEEFPECAMLRRHPEPPQSNFEPLVKAGKHQGFEINTLSGKDLAKSLEAAHKVDNP
YFNTMLKVLATRCMMQAVYFVSGMLQPTEFFHYGLACPIYTHFTSPIRRYADIIVHRLLA
VCVGADATYPELLDKKKSHALCQNLNYRNRMAQYAGRASVALNTHLFFRERVETEAGYIL
FVRKNALQILIPKYGLEGVLYLNKKGEVSTVNFVYNQEEHTQTCGDVVFRSFDPVEVQLS
LDRSNVQHEKLVFKLVKPEIPGFSVPSPEPESAPVDVKMSEASKRKSPELNAKISGPMKK
KVRRKRNKH
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaccaagacatttttccgaaaaacgaagagtggaaatatctttaagataacc
cgggatcactacctcagggatgatatctggtgcggatcagagatctgtgacaactgtagc
ccaaagttgtcagggaagatcttggacgagagcccaggggctacgagttctttaatcaac
actccgtattatctactgttagatacaaatattgttctagaccagattcacatcctcgag
gaggagctcatctgcaatgtggtaatcctccagacggttctggaggaggtgcgacaccga
agctcaaatgtctacaaatctctggcagatataatctctaatcccaatcgaaaattttac
gtttttgttaatgagcatcgaagggaaacttatgtggagagaatcagaggagagagtgcg
aatgacaggaatgacagggcaatcagagaggccaccaagtggtacaatagtcacctggag
gggataaagacagttctgctgacagatgacaatgataacaaggagaaggcccgcagagag
gggctcctagccttcacgatggaggagtacgtagagtcactggacaacggtggagttctt
gtagataaattaagtaaacgtcagtttgtcctggagggaaagggtgagcctctgttcccc
tgtcacctgaccccagctgagattcacaagggaatcactagtggaaagctcctccagggc
tcgttcttggcgtcgagggagaattttcttgaagggactgtcaatgtggagggaatggat
aaattcgttctcgttcagggaagagttggcttgaacagggctgtcgatggagacgtcgtc
gctctagaacttctgccaaaggaccagtggacagctcccagtgatattgtactccaggac
gaggaagaagaggaccctggggatgtgatcgacgaggaggaaattgtacagaagccaact
aaagaagttgaacgcacaccaactggcaaaatagttggcatcattagacgaaaatggcga
cagtactgtggtatattgcagccaaatgctgtcaaagagaatgtaaggcatctcttcgtg
ccagctgagaggaaaatccccaaagtgaggatcgagacgagacaggcagaggctctctac
tcgcagaggatcatcgtggctatcgactcgtggcccagaaattccaggtatcctctcggc
cactttgtcagggccctcggaaatgttggcgacaaggagaccgagaacgaggtcttgcta
ctcgagcacgatgtaccgcattccagattctctgatgaggtcctcagttttcttcctaaa
ctgccatgggtcattactgagtcggacgtggctcaaagagaggattttcgccacatcgat
gtatgctctgtggaccctccagggtgtactgatatcgacgatgcacttcattgtaaagaa
ctggataatggaaacctggaagttgctgtgcacatagcagatgtatctcattttattcgt
cctggcacggcacttgacaaagaagctgcttctagagcaaccactgtttaccttgttgat
aaaagaattgacatggtaccagaattactgagttcaaatctctgctcactccgtggtaac
gaagagagattcgccttctcctgtctctgggaaatggaccattccgctaacatcatcaat
actcgtttctgtaaatcaataattcgctctcgggctgcaatgacgtacgaagaggctcaa
ttgaaaatcgatgatccgagccagactgacgcaatagccaagtctctgaggggtcttaac
actctggcaaagaaactgaagaaaagacgactggagaacggagcgctggtccttgcgtca
ccggaaatacgttttcaagttgacagtgaaacccatgatccgattgaggttgaggcgaag
aaaatgagggagaccaactcgatggtcgaggagtttatgctgctagctaatatatcagtg
gctaaaaaaattgttgaggaatttccagagtgtgcgatgcttcgacgacatcccgagcca
ccacagtcgaatttcgagcctctggtgaaggctggcaagcaccagggtttcgagataaat
accctctctggaaaagacctggcaaaatccctggaggcagcacacaaagtggacaatcct
tatttcaatacgatgctgaaggtactggcaactcgttgcatgatgcaggctgtttacttc
gtcagtggaatgcttcagccaactgaattttttcattatggcctagcctgtcccatctac
acccacttcacctctcccattaggagatatgctgatataattgttcatcgtcttttggct
gtttgcgtgggggctgacgccacttatccagagctcctcgacaaaaagaagagccatgca
ctctgccaaaatttgaattacagaaacagaatggctcagtacgctggaagagcatcggtt
gctcttaatacccacctcttcttcagggagagagttgaaactgaggctgggtatattctc
tttgtcaggaaaaatgcactgcagatactcattccgaaatatggcttggagggggtactg
tatttgaataagaagggagaagtttctacggttaattttgtgtataatcaggaggagcac
acccagacttgtggggatgttgtgttcagaagttttgatcctgtcgaggtacagttgagt
ctcgacagatctaatgtgcagcatgagaaacttgtgttcaaattagtgaagccagagatt
ccaggatttagtgttccctcgccagaacctgagtcggctccggtcgatgtaaagatgtca
gaagcgtcaaagcgaaaaagtcctgaacttaacgcaaaaatctccgggccaatgaagaaa
aaagtacgaaggaaaaggaacaaacactga
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