Fopius arisanus: 105263890
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Entry
105263890 CDS
T07645
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
fas
Fopius arisanus
Pathway
fas03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fas00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105263890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fas03021
]
105263890
Enzymes [BR:
fas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105263890
Transcription machinery [BR:
fas03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
105263890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
105263890
NCBI-ProteinID:
XP_011298685
UniProt:
A0A0C9QHN7
LinkDB
All DBs
Position
Unknown
AA seq
1692 aa
AA seq
DB search
MGSKFGLSSDNSAKHLYPKSLIFSVFTAEDIKNLSVVKICTPLSFNVLGHPLRGGLYDPC
LGPLNDHSDPCGTCGENVYTCTGHFGHIELPVVVVNPLFHKVLCNVIKLSCLSCFTLQIP
AHVKILLAAKLKLINEGFYTDLEGIDQEVSSILAEPGVGSEGQAQLVREAIEVYVKNLQR
RRKLEKICDDDLQVNTKNVNTLWQIHIESALKQYKPGKICLYCRFPIPKVSILKNRIMIN
NPGMINDEQQAVVQKTQSILLMPDQSRKYLRRIWNNDMEILNVIVPCLTGLSIEYPVDVF
FFEVIPVLPPVVRPVNFLDGQLLEHPQTQVYKHIMQDCLVLRNIIQTIQDGDTSQLPEEG
KLVFETIRGATPLEKLHNAWSALQGNVDHLMDRDMSKTSESMTCQGLKQIIEKKEGTIRM
HMMGKRVNFAARSVITPDPNLNIDEIGIPEAFALKLTYPVAVTPWNVAELRELVMNGPDQ
HPGAVKIEGEDGHVRRINPLDRVSREAIAKRLLTEGHKNQKSFQGVKIVHRHLQNGDILL
LNRQPTLHKPSIMAHKARILKGEKTLRLHYSNCKAYNADFDGDEMNVHFPQNDVARAEGY
FIANVSNQYLVPKDGTPLGGLIQDHVISGVRLTLRGKFLSKQDYMQLVYAGLYDHRGDIQ
ILPPTIIKPVELWSGKQVLSTIIINSIPKGKARINLTAGAKIPAKSWETSPPRKWRQGTE
FSDPKTMSEAEVIIRKGELLSGVLDKTHYGATPYGLIHCMYELYGGPCSSKVLSAFGKVF
QSHLQLCGFTLGIEDILVLPDSDKKRREIIDRCRKIGDDVQRSAVELPEDTPRDVVLEKM
QENHWKNKRFRGLVDRKYKTALDPFTNEINKTCLPAGLRKKFPENNLQLMVTSGAKGSTV
NTMQISCLLGQIELEGKRPPLMISGKSLPSFPPYDSSPRAGGFIDGRFMTGIQPQEFFFH
CMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLTVGYDSTVRDSDGSLVQMYYGEDGLDIL
KSRFLRSEQMEFLVENREAIVDEELVERLKETSDTRNIQKMRKRLRKWKSKHGEEFKKRR
MSGFTLFSEELAGSGGKFSVIDPNIGRSKGSLSLTRKWIRADEEVKKSFERKIPRCPEPL
TSIYRQDIHFGVLSEHLEELVEEYLKSRAGKNCGNEVSRDDIRDMLSCKVMRTFCPPGEA
VGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMMASKNIKTPSMEIPFRN
DLRNIQKQSNKLKLKLTRCVLSDVVRTIKIDRKMETGLNRQLEYTLTIQFLPHKNYKHEF
NVSPKEVLERTETGFFKLMFREIKKIAKVSGTLLHVEDEKKRNAVQEDSMLDEAEDEGSV
RKIKQDFGEEHESSDEDEAPEDEDATAARSKFRHQENREYDDPEEEEVINDEEDDDDEDR
KMAAPEEEIDDEIEMIDLADQAAADQRKIDVTNMYSYALEYDFDAGKFLWCRFKFWLPLK
MIKIDLPTILKTVAGKVVLWETPAIKKAFTFPNSKGETVLKTDGINIVEMFKYDRVLDIR
KLYSNDIYGIAQTYGIEAANKVIVKEVKDVFKMYGITVDSRHLSLIADYMTFDGTFQPMS
RKGMENSASPLQQMSFESSLTFLKTATLQGKRDDLTSPSSRLMLGQPCKTGTGAFDVFLK
MSSALKPIKSSL
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atggggtccaagtttggtttatcctcagataacagtgcaaagcacctgtacccgaagagt
ctaatcttctcagtcttcacagctgaggacataaaaaatctgagtgtggtgaaaatttgc
actccattatccttcaatgtcctggggcatcctcttcgagggggcctgtacgacccctgc
ctggggcccctaaatgaccactcggacccctgtggcacctgcggggagaacgtttacacc
tgcaccggacactttggtcacatcgagctgccggtggtggtggtcaatcccctcttccac
aaggtcctctgcaatgtcataaaactctcctgcctcagctgcttcacactccagatacca
gcgcacgttaaaatcctcctggctgccaaattaaagctgataaacgagggcttttacact
gacctggagggaattgatcaggaagtctcgtcaattctggctgaacctggagttggaagc
gagggtcaggcgcagctggtgcgcgaggccatcgaggtttatgtgaaaaatctccagaga
agacgaaaactcgagaaaatctgtgacgacgatctccaggtcaacacaaagaacgtcaat
actctgtggcagattcatatcgagtctgccctcaagcagtacaaacctgggaaaatctgt
ctctactgtcgattcccaatccccaaggtttccattctaaagaataggataatgattaat
aacccaggaatgatcaacgatgagcaacaggccgttgtccagaagactcagagtatcctg
ttgatgccagatcagtccaggaagtacctgagacggatttggaataatgacatggaaata
ttaaacgtgatagtgccctgtctcactggtttatccatcgaataccccgtggacgtcttc
ttcttcgaagtaattccagtgcttccaccagtggtgcgtccagtgaatttcctggatgga
cagctgctggagcacccgcagacccaagtgtacaagcacataatgcaggactgcctggtc
ctcaggaacatcatccaaacgattcaagacggtgataccagtcaactccccgaagaggga
aaactcgtcttcgagacaattcgaggtgcaacacccctggagaagctccacaacgcgtgg
tcagcactccagggtaacgtcgatcatctgatggacagggacatgtcgaagacatcagaa
tcgatgacatgtcaggggttaaagcagataatcgagaagaaagagggaacaatcaggatg
cacatgatgggaaaacgtgtaaatttcgctgccagatcagtgataactccagatccaaat
ttgaacatcgacgaaattggaattcctgaggcattcgccctgaaactcacgtacccagtg
gcagtgacaccctggaacgtagcagagttgagggaactcgtgatgaatggtcctgaccag
catccaggggctgtgaagatcgagggagaggacggccacgtcaggagaataaatccctta
gacagagtcagcagggaggcaatagccaaaagactcctgacggagggccacaagaaccag
aaatcttttcagggcgtcaagatcgttcacaggcacctccagaatggtgacattctcctc
ctgaatcgtcagccaaccctccacaaaccctcgatcatggcacacaaggcgagaattctc
aagggagagaaaactcttcgtctacattactcaaactgcaaagcctacaacgctgatttt
gatggggacgagatgaacgttcattttccccagaacgatgtagccagggctgagggctac
tttatagctaatgtctccaatcagtacctcgtccccaaggatggaacacccctggggggt
ctcattcaggatcacgtgatatctggagtacgtctgactcttcgaggaaaatttctctcg
aagcaggattacatgcagctggtgtacgcaggactttacgatcatcgaggggacattcaa
attcttcccccgacgattataaaacctgtcgagctctggtccgggaagcaggttctctcc
acgatcatcatcaacagcattccgaagggaaaagccaggatcaatctaacagctggtgct
aagatcccagcgaagtcctgggagacctctccaccgagaaaatggagacagggaaccgaa
ttttctgatcccaagaccatgtcagaggctgaggtcatcatcaggaaaggagagttactc
tctggggttttggataaaactcactacggggcgactccctacggactcatccactgcatg
tacgagttgtacggtggtccctgttcctcgaaagtcctcagtgcctttggaaaagtcttc
cagtcccacctccagctctgtggatttaccctgggtatcgaggacatcctggtcctccct
gacagcgacaagaagcgacgtgagatcatcgaccggtgcaggaaaatcggtgatgacgta
cagaggtcagctgtagagctccctgaggacacccccagggacgtcgtcctcgagaaaatg
caggagaatcattggaagaataagaggtttcgagggctcgtcgacaggaagtacaaaact
gctctggatccatttaccaatgagatcaataagacgtgtctgcctgcggggctcaggaag
aaattcccagagaataatttacagctgatggtgacctctggggctaagggatcaactgtc
aatactatgcagatttcctgtcttctggggcagattgaactcgaggggaagaggccaccc
ctgatgatcagtggaaagtctctacccagttttccaccttatgactcatcacctagggct
gggggcttcatcgatggcagatttatgactggaattcagccacaggagttcttctttcat
tgtatggcaggacgtgagggactaattgacactgctgtcaagactagcagatctggatac
ctccagagatgtctcattaaacatctggagggtttgactgtcgggtatgactccactgtg
agggactctgatggcagtctcgtgcagatgtattatggagaggatggcctcgatattctc
aagtccaggttcctccggagtgagcagatggagtttctagtggagaacagagaggccatc
gtcgatgaggaactggtggaaagactcaaagagaccagtgataccaggaatattcagaag
atgaggaagagactgaggaagtggaagagcaaacatggggaggaattcaagaagcgcaga
atgagtggattcacccttttttcggaggagttggcaggaagtggaggaaaattcagtgtc
attgatccgaatattgggaggagcaaagggtctttgtccttgacgagaaagtggattcga
gctgatgaggaggtgaagaagtccttcgagcgaaaaatccccaggtgtccagaacctctg
acctcgatatatcgtcaggacattcactttggggttctctcagagcacctggaggagctc
gtggaagagtacctgaagtcaagagcgggtaaaaactgtggtaatgaggtgtcgagggat
gatatcagggatatgctgtcctgtaaagtgatgaggaccttctgcccacctggagaggct
gtgggtctcctcgcagctcagtctattggtgaaccctccacccagatgacactgaatact
ttccattttgcgggtcgtggagagatgaacgtgaccctcggtattcctagactccgggag
atcctcatgatggcgtcgaagaacatcaagacacctagcatggagatccccttcagaaat
gacctcaggaacatccagaaacagtccaacaagttgaagttgaaactcacccggtgcgtt
ctgtccgatgtcgtcaggacaattaaaatcgacaggaagatggaaactggtctgaataga
cagcttgagtacaccctgacgattcagtttcttccacacaaaaattacaaacacgagttc
aacgtcagtcccaaggaggtcctggagagaacggaaacgggttttttcaagctgatgttc
agagagataaagaagatagcgaaagtatcagggactcttctgcatgtggaagacgagaag
aagaggaatgcagtgcaggaggactcgatgctggacgaggctgaggatgaggggtctgtc
aggaagattaagcaagactttggggaggagcacgagtcatctgatgaggatgaggcacct
gaggatgaggatgctactgctgccaggagcaagttcaggcatcaggagaatcgagagtac
gatgatcctgaggaggaggaggtaatcaatgacgaggaggacgacgacgatgaggacagg
aagatggcagctcctgaggaggagatcgatgacgagattgagatgatcgatcttgcagat
caggcagctgctgaccagaggaagattgacgtaacgaatatgtacagttatgcattggag
tatgattttgatgcgggcaaattcctctggtgcagattcaagttttggctgcctctgaag
atgattaagatcgatctgccaacgattcttaaaactgttgcaggaaaagttgtcctgtgg
gagacacctgccatcaaaaaagcgtttacttttcctaattccaagggggagactgttctc
aagaccgatggaatcaatattgtggaaatgttcaagtatgatagggtgttggatatccgg
aaactgtattccaacgatatttatggaattgcacagacctatggcatcgaggctgccaac
aaggtcattgttaaggaggtcaaagacgttttcaaaatgtatggcatcactgtggactct
agacatctctctctcattgctgattatatgacttttgatggcaccttccagcccatgagc
agaaagggcatggagaattccgcttctccactccagcagatgagcttcgagagctcgttg
acgttcttgaagactgccacgttgcaaggcaagagagatgatttaacgtcaccttcgagt
cgtttgatgcttggacagccgtgcaaaactggcactggggcattcgacgttttcctgaag
atgtcatcagcgttgaaaccaatcaagtcatccctgtag
DBGET
integrated database retrieval system
