Fopius arisanus: 105265639
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Entry
105265639 CDS
T07645
Name
(RefSeq) uncharacterized protein LOC105265639
KO
K15542
polyadenylation factor subunit 2
Organism
fas
Fopius arisanus
Pathway
fas03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fas00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105265639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fas03019
]
105265639
Messenger RNA biogenesis [BR:
fas03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105265639
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WD40_RFWD3
eIF2A
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_WDR41
Beta-prop_WDR11_2nd
WD_LRWD1
Beta-prop_SPT8
Beta-prop_ACSF4
WDR54
Motif
Other DBs
NCBI-GeneID:
105265639
NCBI-ProteinID:
XP_011301530
UniProt:
A0A0C9REX2
LinkDB
All DBs
Position
Unknown
AA seq
1053 aa
AA seq
DB search
MSANAQFASPPPAINLPNMSVPPPTTPNLSAPPPNLTTISTSGGYQHRFNNHREGRGFFK
PFRPYHAPKVISGGQDALQDEFDGKRLRKSVMRKTVDYNSAIIKSLENRVWQRDYRDRRA
LQPDVMYYPDLLPPPSYVDNPINAVTTRFVKTATNKMRCPIFCMAWTPEGRRLVTGASSG
EFTLWNGLTFNFETILQAHDSPVRTMVWSHNESWMVTGDHAGYVKYWQSNMNNVKMFQAH
KEAIRGLSFSPTDHKLATCSDDGTVRIWDFLRCHEERILRGHGADVKCVHWHPQKSLVIS
GSKDNQQPVKLWDPKTGQSLATLHAHKSTVMDVKWNENGNWLVTASRDHLLKLFDLRNLS
QEVQTFRGHKKEASSVAWHPSHEGLFCSGGSDGAILFWHVGADKEVGAIEQAHDSIVWTL
AWHPLGHILCSGSNDHTSKFWTRNRPGDLMRDKYNLNTLPAGACGIDDHEIADEAAVIPG
MGPEDKINADIEMEEENNSTISGIPGLDLDHTADDSKKLASKKVPYSKPIPRNFQAQWNE
MEAEDPEQVEALNAIVNQLIETTPGAVPLNEVTPNAIILYGKMVPVEPGSKLADAILKGN
DAINKLVTAGEIEELKDVALTTPEPVADPEDFLQDEGEIDYSKVPDIDLPAPLPSSKFAQ
NPELLKALNRGGKRKFDQLIGWSDNERNSRLHQPVFGGSMLEDSCNSDTDLRHMMNITGV
DMAAYLAQDEDLRRLNSLDRMNNIGSMNTNSINRDEDMRFGGGSSGPGRPDFDGRNSFGD
RDFRLNIPPPNFKSSNQDGDSFGDSDSRPRPWDDDKDNRNFDKRDMLSSSLGNNSQLGSL
SLQMGGLSSSSSHLNTNHHNMQNISPNMPPTMNLSTNLALNPTLQNKTNNLLNSGITDGL
PPHMMHLPPNFGPNGPNPSQLPPNFNPNFRPPNGNFPGNHQFRQMGPFAHNNFGNFQGPP
GFRCPNPNNPPPNFERGNFGPNFRGQMGGNGGNSGGFNSGFNNKNFGGGNNGGGKNGGRG
MGRNNDNNRSNYGGRGRGRDGEGSRGSRGRDNY
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctaatgcacagtttgccagtcctccgccagcgattaatttaccgaatatgtcg
gtaccaccgcctacaacaccaaatttatcagctcctccaccgaatttaacgacaattagt
acctctggaggttatcagcatcggtttaacaatcacagggaaggacgaggattttttaaa
cccttcaggccttatcatgcacctaaagttatttctggaggacaggatgcattacaggat
gagtttgatgggaaaaggctgaggaaatcggttatgaggaaaactgtcgattataattcg
gctattatcaagagcttagagaatcgagtttggcagagggactacagagatcgacgtgca
cttcaaccggatgttatgtactatccagacctcctcccaccacctagctacgtcgacaat
ccgataaatgctgttacaactcgtttcgttaaaacagcaacaaataaaatgcgttgtcct
attttttgcatggcgtggacgccagagggtagaagattggtcaccggagcatccagtgga
gaatttacactttggaatggattgacgttcaatttcgaaacgattcttcaggctcatgac
agtccggttagaacgatggtttggtcacacaacgagagctggatggtgactggtgatcat
gctggatacgtcaagtactggcagagcaacatgaacaacgttaagatgtttcaggcccac
aaagaagcgattagaggactcagtttcagtccaacggatcacaaattggcgacgtgcagt
gatgatggaaccgtgaggatttgggactttttacgatgtcacgaggagagaattctcagg
gggcatggagcagacgtgaagtgtgtgcactggcatccgcagaagagtctagtcatctct
gggagtaaagacaatcagcagcctgtgaagctatgggatccgaaaactggacagtctctt
gctactcttcatgcacacaagagcactgtgatggacgtcaagtggaatgagaacggcaac
tggctggtaacagcctccagagatcacctcctcaagctttttgatttgcgaaatttgagt
caagaggtgcaaacattcagaggacacaagaaagaggcatccagtgttgcctggcatccc
agccatgagggactattctgtagcggaggaagtgatggcgctatattattttggcatgtt
ggagctgataaggaagtgggggctattgaacaggctcatgacagcattgtatggacattg
gcgtggcatccattaggtcatatcctctgttcagggagtaatgatcacacgtctaaattt
tggacgagaaacagaccaggagatctcatgagagacaaatacaatctcaatactctacct
gccggtgcttgcggaattgatgatcacgaaatcgctgatgaagctgcagtgatccctgga
atgggtccagaagacaaaattaatgcggatatcgaaatggaggaggagaataattcaact
atctcaggaatccccgggttggatcttgatcatactgctgatgacagtaagaaactggcg
agcaagaaagttccatattccaagccaattccaaggaatttccaagctcaatggaatgaa
atggaggctgaagatccagaacaagttgaggctttaaatgccatcgttaatcagctgatt
gaaacgaccccgggagctgtacctctcaatgaagtcacaccaaatgccattattttgtac
ggaaaaatggtccccgttgaacctggttcgaagctagccgatgcaattctgaaaggcaac
gacgccataaataaactggttaccgccggtgaaatagaagagctgaaagacgtagcgctg
acaacccctgagcctgtcgctgatcctgaagactttctgcaggacgaaggtgaaatcgat
tactcaaaagtgccagatattgatctaccagcaccacttccctcctcgaaatttgcccag
aatccagagctcctgaaggccttgaatcgcggaggaaaacgaaagttcgatcaattgatc
ggttggtcagacaacgagagaaattctcgcctccatcagccagtgtttggaggttcgatg
ctggaggactcctgcaacagcgacacagatctccgtcacatgatgaacataacaggcgtc
gatatggcagcatatctagcccaggatgaggatctcagaagattaaacagcctagaccga
atgaataatataggtagcatgaataccaatagcataaatagggatgaggacatgcgcttt
gggggcggctcgagtggtccaggaaggcctgatttcgatggacggaattcatttggggat
cgagactttcgtctcaacatcccaccacccaatttcaaatcctctaatcaagatggagac
agctttggagacagtgacagcagacctcgaccctgggatgatgacaaggataatcgaaat
ttcgataaacgagacatgttgtcctcgtctcttggtaataattcccagttgggctcatta
tccctgcagatggggggactttcatcaagctccagtcatcttaacacgaatcatcacaat
atgcagaatatctcacccaatatgccaccaacgatgaacctctcaaccaatttggccctc
aatcccactcttcaaaataaaacaaataatctcctgaatagtggcatcaccgatggtcta
ccacctcacatgatgcatctaccaccgaattttgggccaaatggacccaatccgtcccaa
ttaccccccaacttcaatcccaattttcgacctcctaatggaaatttccctgggaatcat
cagttcaggcaaatgggaccctttgcacacaataattttggtaattttcagggtccaccg
ggattcaggtgtcccaatccaaataatccaccccccaatttcgagaggggcaactttggt
cccaattttcggggacagatgggtggtaatggtggaaatagtggaggatttaattcgggt
ttcaataataaaaattttgggggaggaaataatggaggtggtaaaaatggtggcagaggt
atggggaggaataatgacaataacaggagtaattatggagggagagggagaggacgggat
ggtgaaggatcgaggggttccagggggagggataattattga
DBGET
integrated database retrieval system
