Fopius arisanus: 105265851
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Entry
105265851 CDS
T07645
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
fas
Fopius arisanus
Pathway
fas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105265851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fas03019
]
105265851
Messenger RNA biogenesis [BR:
fas03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
105265851
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Retrotran_gag_3
TRAPPC9-Trs120
Motif
Other DBs
NCBI-GeneID:
105265851
NCBI-ProteinID:
XP_011301923
UniProt:
A0A9R1T3L9
LinkDB
All DBs
Position
Unknown
AA seq
862 aa
AA seq
DB search
MNNKVNIEECDKDNNNSAQSDDSEKSIENEKKEILPGFSTFDEFVKASFAVLKIGIKAAN
SLPSGENFSYYSCFPTFRNIRQEEIKKVMTSMQRLLECTGASGSITRGDREEKFDLLTEA
NDILLDRATACMDKESGVSNDHNIQLITTQTKKNNYGSWNTSVISSQDPRNQSPSPSTPN
GIRLLAAKNIHRPQLSFKDKIDNSPKPWEPRIKDKPNALIPLAVHLIETERGPAWTHPYE
FELDKLTYPEHQLLPKAPVKYKSLEETPLIVIEKPQDLKILLNDLRNYEEIAVDLEHHSY
RTFQGITCLMQISTRDTDYLIDTLALRSELHVLNEIFTKPSILKVFHGADNDIQWLQRDL
SLYVVNMFDTHQAAKHLKLPYLSLAYLLKTHCHIDPNKHFQLADWRIRPLPEELMKYARE
DTHYLLYIKDILRNSLIESANGQSNILRAAYDRSTDICRKIYEKPLCDEESCMAIYRKSQ
KMFNNRQLYALKELFTWRDQTARQEDDSYGYVLPNHMLLNIAETLPREMQGVLACCNPIP
PLVRQNLLKLHKLILRAREQPLIKPVLMEQDMRQRLGQGNQVDTEAWIYAPHDVSNAEVQ
ANLPCLLDSGELRGNDESSEDDVHPIVTIFDDSRLEDCDGKIMEKLRRTKTLFVSPFERY
KRVLPVIAAQEAEEREREEREREERTAAARTEKEETLQSIDRVRQHFLEVTKERVQSDED
RTLGEMTGRKRKREDEDDVEAVCEEVDVSTPKPGRDSTVADSLRGKRHKEERELQSRNEK
MKGIRVYSGSMDKTRVQKINNRKELAQKGMLPKPNFDYKTVDFSSFQGGSKGDSSKTTVF
QQKQFKDKITKGKKKKKQKLGI
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaaagtaaatatcgaagaatgtgacaaagataataataattcagctcagtcc
gatgattcggaaaaatcaattgaaaatgagaagaaagaaattctcccaggattttccact
ttcgacgaatttgttaaggcgagtttcgccgttctcaagatcgggataaaagcagctaat
agcttaccctcgggggagaacttcagttactactcctgcttcccgaccttcagaaacatt
cgccaggaggagataaaaaaagtaatgacctcgatgcagcgtttgctagaatgtacaggg
gcatcaggtagcataacccgaggtgacagagaggagaagttcgatttgctgacagaagcc
aatgacatccttctagaccgtgcaacagcctgcatggacaaagagtcaggtgtctccaac
gaccacaacatccaactgataacgactcaaacaaaaaagaataattacggttcctggaac
acgtcagtcatctcctcccaagatccacgaaaccagagccccagtccgtccacacccaac
ggtattcgcctgctagctgcgaagaacatccacaggcctcaattatccttcaaagataaa
atcgacaacagcccgaagccctgggagcccaggataaaagataaaccgaatgccctgata
cctctggcagtccacttgatcgaaactgagagaggtccagcctggactcacccctatgag
ttcgagctcgacaaactgacgtatcccgagcaccagctgctccccaaggctccagttaaa
tacaaatccttggaggaaacccccctgatcgtcatagaaaagccccaggacctgaagatc
ctcttaaacgacttgcgaaattacgaggaaatcgctgtggacctggagcatcactcctac
aggacatttcagggtatcacgtgtctcatgcaaatctccacgagggacacagattacctt
attgacactctggccttgaggtcagagctacacgtccttaatgagatattcacgaagccc
tcaattctgaaagttttccatggagctgacaatgatatccagtggctgcagagggatctg
tctctgtacgttgtcaacatgtttgatacccaccaagcagccaaacacctgaagctcccc
tacctgagtcttgcttatctgttaaaaacccactgtcatattgatcccaataagcacttt
caacttgctgactggaggattcgacccctcccggaggaattaatgaaatacgcacgagag
gatacccactaccttctctacatcaaagacatcctcaggaattccctgatcgaatcggca
aacggccagtccaacatcctcagggcagcctacgacagatccactgacatctgcagaaaa
atttacgaaaaacccctgtgcgacgaggagagctgcatggcgatttacagaaagagtcag
aagatgtttaataatcgtcaattgtatgccctgaaggagctcttcacgtggagggaccag
actgcccgacaggaggacgacagctatggatatgtcctgccaaatcacatgctgttgaat
atcgctgagacactccccagggagatgcagggtgttctcgcttgctgcaatcccattcct
ccacttgttcgacagaatttgctgaaacttcataaattaattttgagggccagggagcag
ccattgatcaaacctgtgctgatggagcaggatatgcgtcagaggctggggcaggggaac
caggtggacacggaagcctggatttatgcaccacacgatgtgagtaatgcggaggtccag
gcgaatttaccctgtctgctggattcaggggaattgagggggaatgatgaatcctctgag
gatgatgttcatcctattgtcacgatttttgatgactcgagactagaggactgtgatgga
aaaatcatggagaagttgagaaggactaaaacactttttgtgagtcctttcgagaggtac
aagcgtgtcctgccagtgattgcagcacaggaagccgaggagagggagagggaggagaga
gaaagggaggagagaactgctgcagcgaggaccgaaaaagaggagactttgcagagcatc
gacagggttcgacagcactttttggaggtcaccaaggagagggttcagtctgatgaagac
aggactctcggtgagatgactggccgcaagaggaagagagaggatgaggacgacgtggag
gccgtctgcgaggaggtggatgtctcgacacctaaacctggaagggattccactgtcgct
gattccttgagaggaaagaggcataaagaggaaagggaacttcagtccaggaatgaaaag
atgaaggggatacgcgtttattcagggtcaatggacaaaactcgagtgcagaaaattaat
aataggaaggaattggcacagaagggaatgcttcccaaaccgaatttcgattacaaaact
gttgatttcagtagcttccagggagggagcaaaggagattcctctaagacaactgtcttt
cagcaaaaacagttcaaggacaaaataacgaaaggaaaaaagaagaagaagcaaaaactg
ggtatatga
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