Fopius arisanus: 105266800
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Entry
105266800 CDS
T07645
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
fas
Fopius arisanus
Pathway
fas03020
RNA polymerase
fas03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fas00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105266800
09124 Replication and repair
03420 Nucleotide excision repair
105266800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fas03021
]
105266800
03400 DNA repair and recombination proteins [BR:
fas03400
]
105266800
Enzymes [BR:
fas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105266800
Transcription machinery [BR:
fas03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
105266800
DNA repair and recombination proteins [BR:
fas03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
105266800
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
DUF3137
Motif
Other DBs
NCBI-GeneID:
105266800
NCBI-ProteinID:
XP_011303523
UniProt:
A0A9R1T6C2
LinkDB
All DBs
Position
Unknown
AA seq
1906 aa
AA seq
DB search
MATSDSKAPIRTVKRVQFGIISPDEIRRMSVTEGGIRFPETMEGGRPKLGGLMDPRQGVI
DRNSRCQTCAGNMTECPGHFGHIDLAKPVFHVGFITKTIKILRCVCFYCSKLLVSPHNPK
IKEIVMKSKGQPRKRLTFVYELCKSKNICEGGDEMDINKEGTESTAPDRKPGHGGCGRYQ
PNLRRSGLDVSAEWKHVNEDSQEKKIPLTAERAWEILKHISDEESFILGMDPKFARPDWM
VVTVLPVPPLSVRPAVIMYGSAKNQDDLTHKLADIIKSNNELVRNEQAGAAAHIISENIK
MLQFHVATLVDNDMPGMPRAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVIT
PDPNLRVDQVGVPRSIAQNLTFPEIVTPFNIDKMQELVRRGNSQYPGAKYIVRDNGERID
LRFHPKPSDLHLQCGYRVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSC
TSPYNADFDGDEMNLHVPQSMETRAEVENIHVTPRQIITPQANKPVMGIVQDTLTAVRKM
TKRDVFIEKEQMMNILMFLPSWDGKMPQPCILKPKPLWTGKQIFSLIIPGNVNMIRTHST
HPDEEDDGPYKWISPGDTKVMVEHGELIMGILCKKTLGTSAGSLLHICMLELGHEVCGKF
YGNIQTVINNWLLLEGHSIGIGDTIADPQTYLEIQKAIKKAKEDVIEVIQKAHNMELEPT
PGNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACV
GQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLI
DTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLCGETVEFQNLPT
IKLSNKAFEKKFKFDPTNERYLRRIFNEEIVREMMGSGEVISELEREWDQLNRDRQVLRE
IFPSGESKVVLPCNLTRMIWNVQKIFHINKRAPTDLSPMRVIQGVKDLLEKCIIVAGEDR
LSKQANENATLLFRCLVRSTLCTKCVSEEFRLSSEAFEWLIGEIETRFQQAQVAPGEMVG
ALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGAAA
RDAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIAEDQEFVNVYYEMPDFDPTKIS
PWLLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDDNK
FQDTEEETVDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVYMHLPQTDAKKRIIITDTGE
FKAIAEWLLETDGTSLMKVLSERDVDPVRTFSNDICEIFQVLGIEAVRKSVEKEMNAVLQ
FYGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLLDAASHAE
VDPMRGVSENIIMGQLPRIGTGCFDLLLDAEKCKQGIEIPMAVGAGVMGGAGMFFGSAAT
PSMSPQMTPWNQAGATPGYGASAMSPTLGSGMTPGGACFSPSGASDASGLSPAYSAYSPQ
PGSPGSPGPSMSPYPMSPAGGASPSYSPTSPAYLPTSPSMTPSSPNYSPTSPTYSPTSPN
YSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SHSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPSSPNY
TPASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPSFAGTSPQYTPAS
PTYSPTSPTYSPTSPSYSPSSPQHTAGGSTRYSPSSPNYSPTSPTYSPSSPQYSPSSTKY
SPTSPTYTPTSPSYSPTSPTYSPPVPGYSPTSPTYSPASPAYEPDD
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atggccacgtccgactcaaaggcaccgataaggaccgttaaaagggtccaattcggaatc
atatcgcccgatgaaatacgacgtatgtcagtgacagagggaggcatcagattcccagag
acaatggagggaggtcgtccaaagctgggaggtctgatggatcctcgtcaaggtgtaata
gacagaaactcgcggtgtcaaacgtgcgctggtaacatgacagagtgtccaggtcatttc
ggtcacatcgacctggcaaagccagtattccacgttggattcatcacaaaaaccataaag
atccttcgctgcgtgtgtttctactgctcaaagctcctggtgagcccccacaatccaaag
atcaaggagatcgtgatgaagagtaaaggacagccccgcaaacgcctgacatttgtctac
gagttgtgcaaaagcaagaacatctgcgagggtggcgacgagatggacatcaacaaggaa
ggaaccgaatcaacagcaccagatcgtaaaccaggtcatggtggatgtggtaggtatcag
ccaaatctccgtagatcaggtcttgacgtgagtgcagagtggaaacacgtgaacgaggac
tcgcaagagaaaaaaatacccctgacagctgaacgcgcctgggaaattctcaaacacata
tcagacgaggagtcattcatcctgggaatggatccgaaattcgccagaccagactggatg
gtcgtgacggttctgccagttcccccactctcggtcagaccagctgtcatcatgtacgga
tcagcgaagaatcaggacgatctgacccacaagctagcagacatcataaaatcaaacaat
gaactcgtgagaaatgaacaggctggtgctgctgctcacattatctctgaaaatataaaa
atgctccagttccacgttgccacactggttgataatgacatgcctgggatgcccagggca
atgcaaaaatcaggaaaacctctgaaagctataaaagctagactgaagggaaaggaggga
agaatccgaggaaatttaatgggaaaacgtgtggacttttcagcacgaacagtcatcaca
ccagatcccaatctcagggttgatcaggttggagttcccagaagtatagctcaaaattta
acattcccagagatagtgacacctttcaatattgataagatgcaggagctcgtgaggaga
ggaaactcacagtatccaggggctaagtacatcgtcagggacaatggtgaacgaatagac
ttgagattccatccaaaaccatcggatcttcacctgcaatgtggctatagggttgagaga
cacattcgtgatggtgatttagtgatattcaatcgtcaaccgacactccacaagatgagt
atgatgggtcacagggttaaagtactcccctggagcaccttcaggatgaatttaagctgt
acatcaccttacaatgctgattttgatggtgacgagatgaatcttcatgtccctcagtcc
atggagacacgagctgaggttgaaaatattcacgtgacacccagacagattataacacct
caagccaataaaccagtaatgggtattgtccaggataccctgacagctgtaagaaagatg
acaaaacgtgatgtcttcattgagaaggaacagatgatgaatattcttatgtttttacca
agttgggatggcaaaatgccacagccttgcattctcaaacccaaacctctgtggacaggc
aagcagatattctcacttattattccagggaatgtaaacatgattaggacacactcgaca
catcccgacgaggaggacgatgggccctacaagtggatctcaccaggtgataccaaagtt
atggtcgagcatggtgaactgataatgggaattctgtgcaaaaaaactctaggaacatct
gcaggttctcttcttcacatctgtatgttggaattgggtcatgaagtttgtggaaaattc
tatggaaatattcagactgttataaacaattggctgttgctggagggccactcgattggt
attggtgacactattgctgatccccagacctatctggagattcagaaagccatcaagaag
gccaaggaggatgtcatagaggtaatccaaaaggctcacaacatggagctagagccaaca
cctggtaacacccttcggcagacatttgagaatcaagtgaatagaattttgaatgacgct
cgtgacaaaactggaggttcagctaaaaaatcactcactgagtacaacaatttgaaggct
atggtggtgtcaggctccaagggctccaacatcaatatctctcaggttattgcttgtgtg
ggacagcagaatgtcgagggtaaaagaattccatttggtttcagaaaacgaacacttcca
cactttatcaaggacgactatggtccagagtccagaggattcgttgagaattcttatctc
gctggtttgacaccatcggaattttattttcacgcaatgggaggacgtgagggtctcatt
gatactgctgtcaagacagctgagacaggatacattcagagacgtttgatcaaagctatg
gagtctgtcatggtgcactacgatggaacagtcagaaattctgtgggacagctcattcag
ttgcgttatggtgaggatggactctgcggagaaaccgttgaattccagaatttaccgaca
attaaactgagtaataaagcattcgagaagaaatttaaatttgatccgaccaacgagaga
tatctcaggagaattttcaatgaagagatagtgagggagatgatgggctcgggagaggtg
atatcagagttggaacgtgagtgggatcagttgaacagggatcgtcaggtcctcagggag
atatttcccagtggtgaatccaaggtggtgcttccctgcaatttgacgagaatgatctgg
aatgttcagaagatatttcacatcaacaaacgtgcacccactgatctcagtcccatgagg
gtcatccagggtgtcaaagatctccttgaaaaatgtataattgtagctggtgaggataga
ctgagcaaacaggccaacgagaatgcaacactcctgttcagatgtctcgtgagatcgaca
ctttgcacaaaatgtgtatcagaggagttcagattatcgagtgaggcattcgaatggctg
attggtgagattgagacgagattccaacaggcacaggttgcacctggagagatggtcggt
gcactggctgctcagagtcttggagaacctgccacacagatgacactcaatacttttcat
tttgctggtgtatcatccaagaacgtaacacttggtgtaccgaggctcaaggaaattatt
aatatcagtaaaaaaccaaaggcaccgtctctcacggttttcttgactggtgcagctgct
agggatgctgagaaagctaaaaatgttctctgcagacttgaacacacaactctgaggaag
gtaacagccaatacagctatttattacgatccagatccccagaatactgttatcgctgag
gatcaggagttcgtcaatgtctactacgaaatgcctgactttgatccaacgaaaatatca
ccctggctacttcgcattgagctggatcgtaaacgcatgacagataaaaaattgactatg
gaacagattgctgagaagattaatgctggttttggtgatgatctcaactgtattttcaat
gatgacaatgcagagaagctagtccttcgtattcgtataatgaacagtgatgataataaa
ttccaggacacggaggaggagactgttgataaaatggaggatgatatgttcctgaggtgc
attgaagctaatatgctgagtgatatgacgcttcagggaatcgaggcgataggtaaagtg
tacatgcacttgccacagactgatgctaagaagagaattataataacagatactggtgaa
ttcaaggctattgctgagtggttacttgagactgatggtacaagtctcatgaaggtttta
tctgaacgagatgttgatcctgtgagaacattcagtaatgacatttgcgagatattccag
gttctggggattgaggctgtccgaaaatcagtggagaaagagatgaatgctgtactgcag
ttctatggactgtacgttaattatcgacatcttgctctcttgtgtgacgttatgacggct
aaaggacacttgatggctatcacccgtcatggtatcaacaggcaggacactggtgcactt
atgagatgctcattcgaggagactgttgacgttctcttggacgcagcatctcatgctgaa
gtggatccaatgaggggtgtctctgagaacataatcatgggacaattgccgagaattgga
actggatgcttcgatttgctgttggatgctgaaaaatgtaaacagggaattgaaatacca
atggctgttggagctggtgtgatgggtggtgctggtatgttctttggaagtgctgcaaca
ccaagtatgagtccccagatgacaccgtggaatcaagctggtgctacaccaggatatggg
gcatcagcaatgtcaccaacgttgggcagtggaatgacacctggtggcgcatgtttctca
ccatctggtgcttcagatgcatctggattgtcgccagcttattcagcttattcaccgcaa
cctggaagccctggaagtccgggaccaagcatgagtccttatccaatgtcaccagctggt
ggtgcatctccgagttattcacccacatcaccagcttatcttcctacatcaccaagtatg
acaccatcgagcccaaattattcaccaacaagtcccacatactcaccaacaagtcccaat
tattcaccaaccagtccaagttattcaccaacgagtccaggatattcaccagcaagtccc
agttattcaccaacgagtcccagctactcaccaacgtctccaagctattcgccaacatct
cccagttactcaccaacatctccgagttattctccaacgagtccaagctactcaccaacc
agtcacagttattcacctacatctcccagttactcacccacgtcaccgagttattcacca
acgagtcctggatattcaccaacatctccgagttattcaccaacgagtcctggatattca
cctacatcacccagttattcaccaacatctccgagctactcccccagttcaccaaattat
acaccagcatctccatcttattctccaacctctccatcgtattcaccatcatcacctcaa
tattcaccagcaagtcccagttattccccgagcagtccgaaatattcaccaacaagtccg
agctattcaccaacatctccatcattcgctggtacatcaccccagtatacaccagcgagt
cccacatactcaccaacatctccgacttattcaccaacgagtccaagctactctcctagc
tcacctcaacacacagctggtggtagcacgaggtattcaccaagcagtccaaattactca
ccaaccagtccaacatattcaccatcgagtcctcaatattcaccatcgagcaccaaatat
tcacccacaagtccaacgtacactccaacgagtcccagctattcaccaacaagtccaact
tattcaccacctgtgccagggtactctccaacgagtccaacatattcaccagcatcacca
gcttatgagcctgatgattaa
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integrated database retrieval system
