Fopius arisanus: 105268046
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Entry
105268046 CDS
T07645
Name
(RefSeq) cleavage and polyadenylation specificity factor 73 isoform X1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
fas
Fopius arisanus
Pathway
fas03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fas00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105268046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fas03021
]
105268046
03019 Messenger RNA biogenesis [BR:
fas03019
]
105268046
Transcription machinery [BR:
fas03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105268046
Messenger RNA biogenesis [BR:
fas03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105268046
U7-dependent histone pre-mRNA processing factors
105268046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
DUF4457
Gp58
Motif
Other DBs
NCBI-GeneID:
105268046
NCBI-ProteinID:
XP_011305601
UniProt:
A0A9R1TAE9
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MGSQRKAAESQVPAEESDLLSIKPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDA
LPFVDLVEADEIDLLLISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYRWLLSDYIK
VSNIATEQMLYTESDLEASMDKIETINFHEEKDVFGIKFWAYNAGHVLGAAMFMIEIAGV
KILYTGDFSRQEDRHLMAAEIPNVHPDVLITESTYGTHIHEKREDRERRFTNLVHEIVNR
GGRCLIPVFALGRAQELLLILDEYWSQHPELHEIPIYYASSLAKKCMAVYQTYVNAMNDK
IRRQIAINNPFVFKHISNLKGIDHFDDIGPCVVMASPGMMQSGLSRELFESWCTDAKNGV
IIAGYCVEGTLAKTILSEPEEIATMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRILKPP
HVVLVHGEQNEMGRLKAALQREYQDDPSTTMEIHNPRNTVAVELYFRGEKTAKVMGTLAM
ETSRPGEILSGVLVKRNFNHHKLAPSDLSKYTDMTTSHVIQRQSMHFGGSLVVLKHLLGQ
IAGNLEYVDDRKIRVFKNVDVTVDGKIVTMEWLATPVNDMYADSVFTALLQAELMDNPPK
TLPPPTKMDRMHFKMCLIEMLQEMFGEDSVPKIFKGEQLYVTVDGKKAHIDLMGLNVTCG
EDEVFQQIVQTAVSKLHQSLASPSETI
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgggaagccagagaaaagcagctgaatcccaggtaccagcagaggagagtgatctcctc
tcgataaagcccttgggtgctggtcaggaggtgggtagatcttgcataatgctggaattc
aagggcaagaagataatgctggattgtggaattcatccaggtctctcagggatggatgcc
ctcccgttcgtggacctcgtggaagctgacgagatagatctcctcctgatctctcacttt
cacctggatcactgtggagcactcccctggttcctccagaagacgagcttcaagggcaga
tgtttcatgacccacgcgacaaaagccatctatcgctggctcctctctgattacatcaag
gtctccaacatcgcgaccgaacagatgctgtacactgagtctgaccttgaggcaagcatg
gacaaaatcgagacgataaattttcacgaggagaaagatgtcttcgggattaaattctgg
gcgtacaacgctggtcatgtcctgggggctgccatgttcatgatagaaattgcaggtgtg
aagatcctgtacaccggagacttcagtcgccaggaggatcgtcacctgatggcagcggaa
attccaaatgtccacccagatgtgctgataaccgagtcaacatacggcactcacatccac
gaaaaacgagaggaccgagagcgacgtttcactaatctcgtccacgagatagtgaatcgt
ggtggtagatgcctgattccagtattcgccctgggtcgtgcccaggagttgctattaatt
ctggatgagtactggagtcaacatccagagctacacgaaattcccatctactacgcctca
tcattggctaaaaaatgtatggcagtttatcagacgtacgtaaacgcgatgaatgataaa
attcgtcgtcagattgcgataaataatcccttcgtgttcaaacacatatcaaacctgaag
gggatcgatcacttcgatgacattggtccgtgcgtggtgatggcatcaccaggaatgatg
cagagtggtttatcgagggaattatttgaatcctggtgtacggacgctaaaaatggagtg
ataatcgctggttactgtgtcgagggtaccctagccaagactattctctcagagccagag
gaaatagccacaatgagtggacagaagctcccactcaagatgtcagtggattacatatca
ttctcagctcacactgattaccagcagacatccgagttcatcaggatcctgaaaccaccg
cacgtggtgctcgtccatggggagcagaatgaaatgggaagactgaaggctgcccttcag
agagagtaccaggacgatcccagcaccaccatggaaattcacaatccaaggaatactgtt
gctgttgaattgtacttcaggggtgagaagacagccaaagtcatgggtaccctcgccatg
gagacatcgagacccggtgaaatactgtctggtgttctcgtcaagaggaacttcaatcac
cacaaattggcaccatctgatctgtcaaagtacacggatatgacaactagtcacgtcatt
cagagacagagcatgcacttcggtggatctttagtggtcctaaagcatctcctgggacaa
attgctggtaatctcgagtacgtcgacgacagaaaaatacgagtgtttaaaaatgtcgat
gtcactgtcgatgggaaaatagtaacgatggagtggctcgctacacctgtcaatgacatg
tatgcagattcagtttttactgctctccttcaggctgaactcatggacaatccacccaag
acactacctccaccaactaaaatggatagaatgcattttaagatgtgtctcattgagatg
ctccaggagatgttcggggaggactcggtgcccaagatattcaagggagagcagctctat
gtcactgttgatggaaaaaaagcacatattgatctgatggggctcaatgtcacctgcgga
gaggacgaggtatttcagcagattgttcagactgctgtctcaaaacttcatcagtcactg
gcgtctccctccgagaccatctga
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integrated database retrieval system
