Fopius arisanus: 105268509
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Entry
105268509 CDS
T07645
Name
(RefSeq) transcription elongation factor SPT5-like
KO
K15172
transcription elongation factor SPT5
Organism
fas
Fopius arisanus
Pathway
fas03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
fas00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
105268509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fas03021
]
105268509
03019 Messenger RNA biogenesis [BR:
fas03019
]
105268509
Transcription machinery [BR:
fas03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
105268509
RNA polymerase I system
105268509
Messenger RNA biogenesis [BR:
fas03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
105268509
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
KOW6_SPT5
KOW
KOW7_SPT5
KOW2_Spt5
Spt5-NGN
KOW5_SPT5
KOWx_SPT5
Spt5_N
CTD
KOW1_SPT5
GPKOW_C
SH3_KIN17_C
Motif
Other DBs
NCBI-GeneID:
105268509
NCBI-ProteinID:
XP_011306468
UniProt:
A0A9R1TCC7
LinkDB
All DBs
Position
Unknown
AA seq
1107 aa
AA seq
DB search
MPISRHGSYSGSESDRGGSDSEAEDNQSLKSGSVRSGSRSHSRSRSHSRSRSNSASGSDR
VRDDEAEEAKSGEEEPSEPEEEPEGEELDSEEEEDDEDERPRKKKKKDRICGFIDDEAEV
DDDVEDDEEWEEGAQEIGIVGNEVDELGPTAREIEGRRRGTNLWDSQKEDEIEEYLRKKY
ADESVAARHFGDGGEDMGDEITQQTLLPGVKEPNLWMVKCRIGEEKSTVLLLMRKFLTYQ
FTNEPLQIKSVVAPEGVKGYIYIEAYKQPHVKAAIESIGNLRMGIWKQQMVPIKEMTDVL
RVVKEQTGLKAKQWVRLKRGIYKDDIAQVDYVDLGQNQVYLKLLPRIDYTRPRGALRTAQ
SESEALKRKKKRRPPAKPFDPEAIRAIGGEVTSDGDFLIFEGNRYSRKGFLYKNFTTSAI
IAEGVKPTLSELEKFEEAPEGIDIELSGTNGAIGKDDVAITHSFSTGDNVEVCEGELMNL
QGKIVSIDGNMIMVLPKHEELNEPLEFQANELRKYFKMGDHVKVVAGRYEGDTGLIVRVE
QNRVVLFSDLSMHELEVLPRDLQLCSDVATGVDRLGQFQWGDLVDVDKQTVGVIVRLERE
NFHVLQNDGKVVQKRPQELTKRRENRNTFALDHQQNEIRKKDIVKVVDGPHTGRDGEIKH
LYRSFAFVHSRMYVDNGGIFVCKTRYLQLAGGTKAVSAVSPMSGSMSPRISSPMHPSGGF
GRGGGGGRGRGRGAGPRRDRELIGTTIKITGGPYKGNVGIVIDATESTVRVELHSTCQTI
SVDRSHIANIGVPTKDGGFSSYSRTPAYSSGGQTPMYGRDGSKTPMHGSQTPMYENGSRT
PHYGSMTPSHDGSRTPGQSGAWDPTVTNTPARNNDFDSYSIEDGGSPGYAPGYPSTGGPF
TPQTPGTMYGSEQSYSPYQPSPSPVASATASPSPAGYVATPSPSGTGYTTSPHGVFPSPS
PIGYSPMTPGAGGSPYNPQTPGAGLDTGIGGGLMGNNEWHTVDIEVRIRDSHQDPALAGQ
QGVIRGISGGMCAVFLPAEDRVVNLVCEQLEPVVPTHGDRVKVVLGEEREAVGTLLSIDT
QEGVVKLTTGELKMLQLRYLCKMKTPA
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgccaatttctagacacgggagttattctggatcggagagtgatcgtggaggatctgac
agcgaggctgaggacaatcagtccttgaagtctggaagtgtaaggtcgggatcgcgaagt
cactcgagatcgcggagtcattcgcgttcgagatcgaattcggcatcgggatcggatcgg
gtgagggatgacgaggctgaggaagctaaatccggagaggaggaaccctcggagcctgag
gaggagcccgagggagaggagctggacagtgaggaggaggaggacgacgaggacgagaga
cccaggaaaaagaagaagaaggacagaatatgtggatttatcgatgatgaggctgaggtt
gacgatgacgtggaggatgatgaagagtgggaggaaggggcacaggagattggaatcgtt
ggaaacgaggtggacgagctggggccaacggctagggaaattgagggtcgcagacgcgga
acgaatctgtgggattcacagaaggaggatgagattgaggagtacttgaggaagaagtat
gccgatgagtccgttgctgctagacacttcggggatggcggtgaggatatgggggatgag
ataacgcagcagacactcttaccaggagttaaagaacctaatttgtggatggtaaagtgt
agaattggcgaggaaaaatccactgttcttctgcttatgcgtaaattcttaacttatcaa
tttacgaatgaaccactgcagattaaatctgtagtggcacctgagggagtcaagggttac
atatacattgaggcgtacaagcagccccacgttaaagctgctattgagagcattggtaat
ctcaggatgggcatttggaagcagcagatggtacccatcaaggagatgactgatgtgctg
agagttgtcaaggagcaaactggcttgaaggctaaacagtgggtcaggcttaaacgagga
atttacaaagacgatatcgcacaggttgattatgtggatttgggacagaatcaagtttat
ctgaagctattgccgagaattgactacacaagacctcgaggggcactccgaacagctcaa
tctgagagcgaagcgttaaaacgcaagaagaaacgacgacctccagccaaaccattcgat
cccgaggccattcgtgctatcggaggtgaagtcactagtgacggtgatttcctgatattc
gagggaaatcgatacagtcgcaaaggatttttgtacaagaattttacgaccagtgcgata
atcgctgagggggtgaagccaaccctgtcggagctcgagaagttcgaggaggcaccagag
ggtattgacatcgagctcagtggaacaaatggggctattggaaaagatgatgttgctatt
acccactcgttcagcactggggacaatgtggaggtgtgcgagggagagttgatgaatctc
cagggtaaaatcgtgtcgatcgatggcaacatgattatggtactgccgaagcacgaggag
ctcaatgagcccctggagttccaggcgaatgagctgagaaagtacttcaaaatgggtgat
cacgtgaaagtcgtggctgggcggtacgagggtgacactgggctaattgtcagagttgag
cagaatcgtgtggttctattctcagatctatcgatgcacgaactcgaagtactacccagg
gatcttcagctgtgctcagacgtggccactggtgtcgacaggcttggacaatttcagtgg
ggagatctggtggatgttgataagcaaactgtcggtgtaattgtacgtcttgagcgtgag
aatttccacgtactacagaatgacggtaaagttgtgcaaaagaggccccaggaattaaca
aaacgacgagaaaaccgcaatacatttgccctggatcatcagcagaatgaaatacgtaaa
aaagatattgttaaggtcgtggatggaccacacaccggtagagatggtgagattaaacat
ctctaccgtagttttgcatttgtacattcacgaatgtacgtggataacggtggtatattc
gtttgtaaaacgcgatatctgcaactggctggtggtaccaaagctgtttctgctgtttca
ccgatgtcgggatcgatgtcaccgaggataagctcgcccatgcatccgagcggtggtttt
gggagaggtgggggaggaggaagaggtcgtggccgaggcgctggtccgcgtcgtgatcgc
gagctcattggaacgacgattaaaatcactggtggcccatacaaagggaacgttggaatt
gtcattgatgctactgagagcacagtcagagtagagcttcattcaacatgccaaacaatc
tccgttgacagatcgcacattgcgaacatcggagtaccaaccaaagacgggggtttcagc
tcgtacagcagaacaccggcttattcgagtggagggcagacccccatgtacggaagggac
ggctccaagacccccatgcacggatctcagaccccgatgtacgagaatggctcgagaaca
cctcattatggttctatgacaccttctcacgacggctcaaggacaccaggacagtctggc
gcgtgggatccaacggttaccaatactccagcgagaaacaatgatttcgacagttacagt
atagaggacggtggctcaccaggttatgcccccgggtatccatcgactggaggacctttt
actccacaaacccctggaacaatgtacggatccgagcagagctacagtccttatcaaccc
agtccaagtcctgttgccagtgccacagcaagtcccagtcctgctggatacgttgccaca
ccatctccatcgggtactggttacaccaccagcccccatggtgtctttccatcaccctcg
cccataggctacagccccatgacccctggcgccggtggaagcccttacaatccacagaca
cctggagctggattggatactggaattggtggaggactcatggggaataatgaatggcac
actgtggacattgaagtgagaatcagagattcacatcaagatccagccctcgctggacaa
cagggtgtcatccgtggcatatctggtggtatgtgcgctgtattcctgccagctgaagat
cgcgtggtgaatctggtttgcgagcaactggagccagtggtacccactcatggtgatcga
gtgaaggtagtactcggtgaggaacgtgaggctgttggcactcttctgtcgattgacacg
caggagggtgtcgtcaaactcaccaccggagaactcaagatgttgcagctgaggtatctc
tgcaaaatgaagaccccggcttag
DBGET
integrated database retrieval system
