Fopius arisanus: 105269902
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Entry
105269902 CDS
T07645
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
fas
Fopius arisanus
Pathway
fas03022
Basal transcription factors
fas03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fas00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105269902
09124 Replication and repair
03420 Nucleotide excision repair
105269902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fas03021
]
105269902
03400 DNA repair and recombination proteins [BR:
fas03400
]
105269902
Transcription machinery [BR:
fas03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105269902
DNA repair and recombination proteins [BR:
fas03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105269902
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
PH_SLA1
DUF2205
Motif
Other DBs
NCBI-GeneID:
105269902
NCBI-ProteinID:
XP_011308799
UniProt:
A0A0C9QVC9
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MTTSSEDVLMQVGQVRYKKGDGTLYVMNERIAWMMDNRDTVSVSHKYADIKIQKISPDGK
SKIQLQLVLHDGTSSTFHFVNKSGQEAQVKDRDDVKELLQQLLPKFKRKVNKEIEEKKKL
LTDNPTLMQLYRDLVPTQVVTTEEFWNLHAPEYTTKARERQEIGVNSAFLAEIKPVTDGC
NGLKYNLTVDIMDCIFKTYPAVKKKHQENVLTDKISESDFWTKFFQSHYFHRDRINAGTK
DLFTECAKIDDQELKKDIQTGINDPLLDITSFEDTTIDECYGSGSGKMDKSSGNIVHQSM
IKRFNQHSIMVMKASTAKQTTEKKNDTTPQVNGSASTGNPSRNSGTDGEPKTKKLRIQEK
LVYDDLDSSKDNNIVSSAPLNLTHVDRYLHGPVPGTGTIEATTEELQTTLSQLKREAHSW
LNGNSLPRQTSLVSPAAAVSALGELTPGGALMKGFREDNVGQLIPLELEKELRSVYVCTC
ELLRHFWRSFPPTTPQLEEKAVRMHEALRRFHTARLKKFEDHLQRDYSAISQHLTTHLNQ
LLNTAYRKFAVWQQRKMQMR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgactacctcatcggaagacgtactgatgcaagttggccaggttcgttataaaaaaggc
gatggaactctttacgtaatgaacgagagaattgcgtggatgatggataacagggacacc
gtatcagtcagccacaaatatgcggatataaagattcaaaaaatttcacccgatggtaaa
tcaaaaattcaacttcaactcgtgctccacgatggcacgtcttctacatttcattttgtc
aataagagtgggcaggaggcacaggtcaaagacagagatgacgtcaaagagctactgcag
caattgctgccgaaattcaagagaaaagtcaataaggaaattgaggagaagaaaaaatta
ttgacagataatccgacactcatgcaactttatcgtgatcttgtacctactcaagtcgta
accactgaggaattttggaatctccatgcaccagagtacacaacaaaggctcgagaacga
caggagattggagtcaatagtgcctttctcgctgaaataaaaccagtgacagacggttgc
aacggtttaaaatacaacctcacagtcgacataatggactgcatattcaaaacgtatcca
gcagtgaagaaaaagcaccaggagaacgtgctaacggataagatatcagaatccgacttc
tggacaaaattttttcaatctcactactttcaccgtgaccgaataaatgcagggaccaaa
gatctcttcaccgagtgtgccaaaatagacgatcaggagttgaaaaaggatattcagaca
ggcataaacgatccactactcgatataacgtcttttgaggatacaacgatagacgagtgc
tacggtagtggttcggggaagatggataaatcttcaggtaacattgtccaccagagtatg
ataaaacgattcaatcagcacagtatcatggtgatgaaagccagcactgccaaacaaacg
acagagaagaagaatgacacaacacctcaggtgaatgggtcagcctcgactgggaatcca
tcgagaaatagtgggactgacggggaaccaaagactaagaaacttaggatacaggagaaa
ctcgtttacgatgacttggactcgagcaaggacaacaatattgtctcgtcagcaccgcta
aatttaacccacgtagatagatatttgcatgggcccgtgcctggcactggtaccatcgaa
gcaaccaccgaggaattgcagacaacattgagtcagctgaaacgagaggctcattcttgg
ctcaatggcaacagcttaccccgacagactagtctagtgagtcctgctgctgctgtctct
gccctcggcgagctcacacctggaggagcactcatgaagggcttcagggaggataatgtt
ggacaattgataccactggagctggagaaagaactgcgcagtgtgtacgtctgcacgtgc
gaactactgagacacttctggaggagcttcccaccgaccacaccccagctcgaggagaag
gccgtcagaatgcacgaggcactgcgcagatttcacacagctagactgaaaaaatttgaa
gatcatcttcaacgggattattcagccatcagccagcatcttactactcacctgaatcaa
ctactcaacacagcataccgcaaattcgctgtgtggcagcagaggaaaatgcagatgagg
tag
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