Fopius arisanus: 105270292
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Entry
105270292 CDS
T07645
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
fas
Fopius arisanus
Brite
KEGG Orthology (KO) [BR:
fas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fas03041
]
105270292
Spliceosome [BR:
fas03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
105270292
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_CcmH_CycH
TPR_6
TPR_11
NRDE-2
UBA_At5g58720
TPR_TmcB
HAT
PPTA
Motif
Other DBs
NCBI-GeneID:
105270292
NCBI-ProteinID:
XP_011309434
UniProt:
A0A9R1U5N2
LinkDB
All DBs
Position
Unknown
AA seq
1048 aa
AA seq
DB search
MSSLSGDENQIEDNEPVRRTRSGRALKAPVATPKKTPAKKTARGRGTRRGAQEIDNTDEN
NPTIVEETDESSETGENGMQQLTGQMVENFEEEVPALQVEQEESQTAENLDNVQNVQMEQ
DIQGVPELEAPPPPVVTTATPTTPILSTLKIKEISQVVEGPEDRVITLEEDSIQQILQTD
PDTVEEAINGGNTDSNQIMDFGDVMETIASAEIPLLNEETGGEAKEISESMEVEASAQQI
ADAVDDIVDDSFEKIVAEEVSTVEGETKSDENTGEGEGEIKKSEPDTEAVSEDEFPTETP
AKEPETEAVSDEELPAAAPADLGETESVSEDELPPDSEKKRKAAKTAAKSAERKVKADTG
AKRKLNAEGEYDPNSPTSETNEETPAKKVALEVEAEADDKPEVKPASPKKKTLPELDKYW
KAVNEDPSDFTGWTYLLQYVDQENDAEAAREAYEKFLERYPYCYGYWRKYADYEKKKGNP
DNVQKVFDQGLNAISLSVDLWLHYINHCKSVHEKDEAKMREQYERAIQACGLEFRSDGLW
ESYIKWEQEGKRLSRVTALYDRLLSTPTFGYMKNFQSFQEFVSANPPQRILTVDDFLTMR
AEVKVLLKSDETPGAPPTDDVPPGEEPAAHEIPPTDEETRVIREKIMSSRRKMHKANANA
VAARRTYEEGIKRPYFHVKPLERCQLKNWKEYLDFEIEQKDQDRIIILFERCLIACALYD
EFWLRFVRYLESLTGDNAEKIRDVYSRACTVHHPKKPNLHLQWATFEEGQGNFDKAAEIL
ENIDTVMPNLLQVAYRRINLERRRGDLDKSCVLYESYITNSKNRTIANNIAVKYARFLCK
CKNDIDKAVKVLLKATEKDKDNPRLYLQLIDLGLQRNPVDTQEVVGYMDLFIEREHADLE
QRVLFAQRKVEFLEDFSADIKQVLKAHEQFQKCIKQAKERKKSKNEDNKVDSSPPKKGKT
SDTSSVPPPPTASSQSSYQYSSSASGPYQSQQQFQSGQYGSQSGYQQSYQQYPPPSDPNY
ANYQNWQYSQSGPQAYGPYNQWSSYNYY
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctttgagtggcgatgagaatcaaatcgaggataacgagccagtgaggagaacg
agatcaggacgtgcacttaaagcaccagtggcaacgccgaaaaaaacacccgccaagaaa
acagctcgaggaagaggtaccagacggggggctcaggaaattgacaatactgacgagaat
aacccaacgattgtagaagaaactgacgagagcagtgaaactggtgagaatggtatgcaa
caattgactgggcaaatggtggagaattttgaggaggaggtgccagcccttcaggtagaa
caagaggagtctcagacagcagaaaatttggataacgtacaaaatgttcagatggaacaa
gatattcagggagtacctgaactagaagctccacctccaccagtggtaaccacagccacc
cctacaacaccaattctatctaccctgaagataaaagagatatcccaggtggtagaaggt
cctgaggacagagtcatcaccctggaggaggacagtatacaacaaatactgcagactgat
cctgacaccgtggaggaggcaataaacggtggtaataccgattcaaatcagattatggac
tttggggacgtcatggagacgatagcctcagcagaaattcccctgttgaatgaagaaact
gggggcgaggccaaggaaattagcgagtctatggaggtcgaggcatctgcacagcaaatt
gctgatgcggttgatgatattgtggacgattcgttcgagaaaattgtcgctgaggaagta
tctactgtcgagggggaaacgaagtctgacgaaaatactggagagggcgagggggaaata
aagaagagtgaacctgatactgaagctgtctctgaggatgagttccccacagagactcca
gccaaggagccagaaaccgaggcagtgtcggacgaggagctgccagcagcagctccagct
gatctcggtgagactgaatcggtctctgaagacgaattgcccccagatagcgagaaaaaa
cgaaaggccgctaaaacagctgccaaatcagcggagagaaaagtcaaagcagacactgga
gctaaacgtaaattgaatgcagagggagagtacgatcccaattcaccaacctcagaaaca
aatgaagagacacccgccaagaaagtggctctggaagtggaggcagaggctgatgataaa
ccagaggtcaaaccagcctctcctaaaaaaaagactctaccagagctcgataaatattgg
aaagccgttaatgaggatccctccgattttactggatggacatatctactgcagtatgtt
gatcaagagaatgatgcggaagccgcacgtgaagcgtacgaaaaattccttgaacgttat
ccctattgctacggctactggcgaaaatacgccgattatgagaagaagaagggaaatccg
gacaacgtacaaaaggttttcgatcaaggattgaatgctatttcgctcagtgtcgacttg
tggctccattacatcaatcattgtaagagtgtacatgagaaggacgaggccaagatgaga
gagcagtatgaaagggccattcaggcatgtggtttggaattcagatctgacggtctctgg
gagagctacatcaaatgggaacaagagggaaaacgtctgagcagagtgacagccctttac
gatcgcctcctgtcaactccaacattcggctatatgaagaattttcaatcgttccaagaa
tttgtctctgccaatcccccccagcgcattctaacagtggacgacttcctgacgatgcga
gcagaggtaaaagtcctactcaagtcagacgagaccccaggagcacccccaacagatgac
gtaccaccaggtgaggagccagcagcccacgagattccaccaacggacgaagagacacga
gtaatacgagagaaaattatgagcagcaggcgcaagatgcacaaggcaaatgcaaacgct
gttgctgctagaagaacttacgaggagggaataaaacgcccttatttccacgttaaacca
ttggagagatgccagttgaagaattggaaagagtatctggactttgagatcgagcagaag
gatcaggacagaataattattctttttgagcgttgtctgatagcttgtgctctctacgat
gaattttggttgagatttgtaaggtatttggaatccctgactggagataatgctgagaaa
attcgtgacgtctactcgagagcctgcacagtccatcaccctaagaaaccaaatcttcat
ctacagtgggcgaccttcgaggagggccagggtaattttgacaaagctgctgagattctc
gagaatatcgacaccgtcatgccaaatctgctccaggttgcatatagaagaatcaacctg
gagagacgacgaggggatctcgacaaatcctgcgtcctctacgagagttacataacaaac
agtaaaaatcgaacaattgccaataatattgctgtcaaatacgcaagattcctatgcaag
tgtaaaaatgacattgataaagctgtcaaagtcctgctcaaggccaccgaaaaagacaag
gataatcccaggctgtatctacagctgatcgatctcgggttacagagaaatcctgtcgat
acacaagaggtcgtgggatacatggacctgttcattgagagagagcacgctgacctagag
cagagagtactcttcgctcagaggaaggtggagttcctcgaggatttcagtgcggacata
aaacaagtgctcaaggcacacgaacagttccagaagtgcatcaagcaggcgaaggagaga
aagaaatcgaagaatgaggataataaagttgattcatcaccaccgaagaagggaaagacc
tcggatacatcgagtgtaccacctccaccaacagcgagttcccaatcgagttatcagtat
agcagttcagctagtggtccctatcaatcacaacagcagttccaaagtggccagtatggc
agtcagagtggatatcaacagagttaccaacagtatccacccccatcagatcctaattac
gctaattaccagaattggcagtacagccagagtggtccacaagcatatggaccctacaat
caatggagctcgtataattattactaa
DBGET
integrated database retrieval system
