Fopius arisanus: 105270404
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Entry
105270404 CDS
T07645
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
fas
Fopius arisanus
Pathway
fas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105270404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fas03041
]
105270404
Enzymes [BR:
fas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105270404
Spliceosome [BR:
fas03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
105270404
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
SLFN-g3_helicase
Flavi_DEAD
AAA_30
T2SSE
TsaE
Cas3-like_C_2
nSTAND_NTPase5
ATPase
Motif
Other DBs
NCBI-GeneID:
105270404
NCBI-ProteinID:
XP_011309601
UniProt:
A0A0C9R953
LinkDB
All DBs
Position
Unknown
AA seq
887 aa
AA seq
DB search
MKRYKRKDSSEDDSSDSEEERRKRDIQERDEFANRLKARDESKVQKVAMPAGSGAAEAAK
RLKIMEADSREKLLPKLRVESRRQYLEKRKEDKVAELEADILDDEYLFHEEVLTERERNE
RAHKKQLLQLAVEHEKARELERIQRYHMPLEKGKGEVESEPLDPEPPQSEQSKWESHQMT
AAQFKFGVKNKQGRQDYELLLDDEVEFIQALQMPGSVEHHRETPRVMEKPKVLTTIEETQ
KSLPIYAFKKELIQAIRDHQVLIIEGETGSGKTTQIPQYLYESGFTKDDKIIGCSQPRRV
AAMSVAARVAHEMAVKLGNEVGYAIRFEDCTSHRTKIKYMTDGTLHREFLSEPDLASYSV
MIIDEAHERTLHTDILFGLVKDITRFRTDLKLLISSATLDASKFSAFFDGAPVFSIPGRR
FPVDIYYTKAPEADYIDACVVSVLQIHATQPSGDILVFLTGQDEIETCQEMLQERVRRLG
SKLGELMILPVYANLPSDMQAKIFSPTPPGARKVVLATNIAETSLTIDNIVYVIDPGFAK
QNNFNSRTGMESLMVVPISKASANQRAGRAGRVAPGKCFRLYTAWAYQHELEDNTVPEIQ
RINLGNVVLTLKALGINDLVHFDFLDPPPHETLVLALEQLYALGALNHKGELTKLGRRMA
EFPLDPMMAKMLLASEKYRCSEEIATIAAMLSVNGAIFYRPKDKIIHADTARKNFHVPGG
DHLTLLNVYNQWQLSDFSTHWCYENFIQHRSMKRARDVREQLVGLMARVEMELISGITET
VNIRKAITAGYFYHVARLSNGGHYKTAKHNQTVSIHPNSSLFQELPRWLLYHELVFTTKE
FMRSVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKVQGRSRPDGTH
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgaagagatacaaaaggaaagattcctcagaggatgacagcagtgatagcgaggaggag
cgccgaaaacgcgatatccaagaacgagacgaatttgcaaatcgtttgaaggcgagagat
gaatcgaaagttcagaaggtagcgatgccagcgggttctggtgcagcggaggcagcaaaa
aggctaaaaatcatggaagctgactcgagggaaaaacttctaccaaaactccgagtggag
tcacgacgacaatacttggagaaacgaaaagaagataaagtggctgaactcgaagctgat
atattggacgacgagtacttattccatgaagaagtcttgacagaacgtgagagaaatgag
agagcacacaaaaagcaacttcttcaactggcagttgagcacgagaaagccagagagctg
gagaggatccagaggtatcacatgcccttggaaaagggaaagggagaggtagaatcagaa
cccttagatcctgagccaccgcaatcagagcagagcaagtgggaatcccaccagatgacg
gcagctcagtttaaattcggggtgaagaacaaacaagggcgacaggactacgaactttta
ctagacgatgaagtggaattcattcaagcactccagatgcctggaagtgtggaacatcat
cgagagactccacgagtcatggagaaacccaaagtactgactacgattgaagagacacaa
aaaagtttgccaatttatgcattcaaaaaggaattaattcaagccatcagggatcatcag
gttttaataatcgagggagaaacaggctctggaaaaactacccaaatacctcagtacctc
tatgagtctggatttaccaaagatgataagattattggttgctcacaaccgagacgagtt
gcagcaatgtccgtggctgccagagtggctcatgaaatggctgtgaagctcggcaacgag
gtgggctatgccatcaggttcgaagactgcacgtcccatcgaacaaaaataaaatatatg
accgatggtacattgcacagggaattcctcagcgaaccagatcttgcatcctacagtgtt
atgattatcgacgaagcccacgagcgaaccctccacacagacatcctcttcggtcttgta
aaagatatcacacgttttcgcacagatttaaaacttttaatatcatctgctactctcgat
gcaagcaaattcagtgcatttttcgatggcgctccagtattctcgattcccggtcgtcgt
tttccagttgatatttattatacaaaagccccagaggctgattacatcgacgcttgtgtt
gtctcagtgttgcaaattcacgcgacccaaccctcgggggatattctcgtatttctcaca
ggacaggatgagattgagacgtgccaggagatgctgcaggagagagtcagacgacttgga
tcaaaattgggagagctgatgatacttccagtgtacgcaaatttgcccagtgatatgcaa
gcaaagatattctcaccgacgcctcctggggccagaaaagtcgttcttgctacaaacatt
gctgagacatctttgacaattgataatatcgtttacgtgattgatcctggatttgccaag
caaaataacttcaactctagaacgggaatggagagtctcatggtggtgcccatcagcaag
gcgtcagccaatcagagggcgggaagggctgggagagttgcccctggaaaatgcttcaga
ctctacaccgcctgggcctatcagcacgagcttgaagacaatactgttcctgaaattcaa
aggattaatctcggaaatgtggtgttgactctcaaagccctgggcatcaatgatctcgtg
cactttgattttctagaccctccgccacacgagacactcgttttagctttagagcagctc
tatgcactcggagcactgaatcacaagggagaactcacgaaactcggcaggaggatggcg
gaatttcccctggatccgatgatggcgaagatgctgttggccagtgagaagtatcggtgt
tctgaggaaattgctacaatcgctgcaatgctgtctgtaaatggagcaattttttatcgc
cctaaagataaaatcatccatgcagatacagcaaggaaaaatttccacgtgcccggtggc
gatcatctgactttactcaatgtttataatcaatggcagctcagcgattttagcacccac
tggtgttatgagaatttcattcagcacagatcaatgaaacgggcgagagatgttcgtgaa
caattggttggcctgatggcaagagtagaaatggaactcatctctgggattacggaaact
gtaaatattagaaaagcgataactgcgggatatttttatcacgtagcaagattatcgaat
ggagggcactacaagacagccaaacacaaccaaacagtttccattcatcccaatagttca
ctcttccaggagctaccgaggtggctcctgtaccatgagctcgttttcacaactaaagag
tttatgagatcagttacagaaatcgagagcaaatggctgttggaagtcgctcctcactat
tataaaccacgagaattggaggattccaccaacaagaaaatgccgaaagttcaaggacgc
tcgagacctgatggaactcattaa
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integrated database retrieval system
