Fopius arisanus: 105271674
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Entry
105271674 CDS
T07645
Name
(RefSeq) collagen alpha-1(II) chain-like
KO
K19719
collagen type II alpha
Organism
fas
Fopius arisanus
Pathway
fas04512
ECM-receptor interaction
fas04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
fas00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105271674
04518 Integrin signaling
105271674
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
fas00536
]
105271674
Glycosaminoglycan binding proteins [BR:
fas00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105271674
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
105271674
NCBI-ProteinID:
XP_011311679
UniProt:
A0A9R1TM36
LinkDB
All DBs
Position
Unknown
AA seq
1024 aa
AA seq
DB search
MPYLQPSVVYFLFLILIIFNGLLPQIHAAKTRRIRSKSASQQQDQPAPIDYDEYYENYSD
YDETGNETTITTPIRATSTSHDNISIDRGRTSESPDSTTVSSPVVELSNNTEPLSTEMVP
GESNQMNSIARIRGEQGRPGEDGQPGIAGTPGAPGMPGSPGPPGAIPDMSLYYQQLALAQ
ASDDKGPIDAASSLYNPLSYLQAPVGPVGPRGSQGPSGVPGLQGLQGPRGETGDPGLPGL
PGPQGTRGLPGFPGKDGEPGDDGETGQPGSQGVRGLRGLPGLPGIPGSKGHHGLPGLDGA
KGEQGTIGERGASGAPGSAGPTGPPGQTGPRGEKGREGAQGPPGVRGIDGTNGQPGQSGP
TGKVGSPGFPGVPGMKGDQGFPGLKGSQGYSGQKGDSGRNGEPGENGVEGPPGRDGIPGE
KGIVGTPGLVGVPGFPGARGFPGIAGIPGSTGAKGFPGVAGEKGFKGDIGMKGDFGAPGP
RGQPGAPGIDGKRGKRGPRGPVGVTGLPGTQGSVGERGLPGMPGPSGAPGARGLRGLPGE
VGSPGRGGVEGKTGVPGLTGLQGVQGVPGEIGPEGPIGKTGPPGLNGRAGEKGPPGLIGL
QGESGSPGQPGSTGPMGPMGLTGDRGPKGEAGIRGVDGPQGPKGRPGLPGIEGVKGDRGF
EGPKGSKGHRGLMGLQGLPGMPGAIGEKGIIGIPGLAGKDGIPGLRGPPGRDGNPGPIGL
AGNPGSPGVAGEDGRQGLPGPVGPIGPPGPPGEGNFGYDAASLAALMMQGQSKGPDGMVG
DAPFRLFGKEMSKDEQNELLMKAYEHLKSTFKNAIQPDGNENAPARTCRDLFIAYPDKPS
GEYWVDPNGGDIRDAILVHCDVNKRATCIFVSPSKTKEINHIDNHNYHGNGIWLSEITDG
IKVSYKADSNQIGFLQLLSIHAEQNLTYHCKNSVAFYDEEHKTYRRGLKLLAWNDVELTP
KGNHRLRYDVTVDGCKARSNEWSTTELSYTTDKPTRLPFVDIGLRDIGKSEQRFWIEFDS
VCYY
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacttacaacccagtgtcgtttattttttatttcttattttgataatttttaac
gggctactcccgcaaattcatgcagcaaaaacaagaagaatcagatctaagagtgccagt
cagcaacaagatcaaccagctccaattgactatgatgaatattatgaaaattattcagat
tacgatgaaaccggcaatgagacgacaataactacccctatcagggccacatctacaagt
catgataatataagtatagatcgcgggcgaactagtgaatccccggatagtactacagta
tcatctcctgttgtagaattatctaataacacagaaccattgtcaactgagatggtaccg
ggggagagtaatcaaatgaattcaatagctagaatacgcggtgagcaaggaagaccggga
gaggatggccaacctggtatcgcagggacaccaggcgctccgggaatgccaggctcgcca
ggacctcctggagctatacctgatatgtctttgtattatcaacaattagctttggctcaa
gcgagcgacgataaaggaccgatcgacgcagcctcatccctttataatccattgagttat
ttacaagcgcctgttggtcccgtcggcccgcgaggatcccaaggaccatctggtgtgccg
ggattgcaaggattgcaaggcccacgaggtgaaacgggggatccgggcttaccaggtttg
ccgggacctcaaggaacaaggggactaccaggatttcctggaaaagatggtgaaccaggc
gatgatggcgaaacaggtcaacctgggagtcaaggtgttagaggtttaaggggattacca
ggcttaccgggtattccgggaagcaaaggacatcacggattgccaggactggacggtgcc
aagggcgagcaagggacaattggtgaaagaggagcatccggagctcctggatctgcagga
ccaacaggacctccgggtcaaacagggccaagaggtgagaaaggtagagaaggggctcag
ggaccacctggtgtgcgtggtattgacgggactaatggacaacctggtcaatccggtcct
actggtaaagttggttcgccgggctttcccggagtgcctggcatgaaaggtgatcaagga
tttcctggattgaaaggaagtcaaggatattccggtcagaaaggagactcagggcggaat
ggtgaacctggagaaaacggtgttgagggtccgcctggaagagacggtataccaggagaa
aaaggaattgttggcactccgggattagtcggcgttccaggatttccgggcgctagagga
tttccaggtatagcaggtattcctggatcaacaggtgctaaaggctttcccggtgttgcc
ggtgagaaaggatttaagggtgacattggaatgaaaggtgattttggagctccgggaccg
cgaggacagccaggagctcccggaatagatggtaaacgtggcaagagaggaccacgggga
cctgtaggagtgacaggacttccgggtacacagggcagtgtcggagagcgtggattgccg
ggaatgcctggtccatcgggtgctcctggagccagaggactgcgtggcctaccaggagaa
gtaggatcaccgggtcgagggggagttgaaggaaaaactggcgtaccgggattgacagga
ctacaaggagtgcaaggtgtaccaggagaaataggtcctgaggggcccattggtaagacg
ggaccgcctggcttgaatggacgagccggagagaaagggccaccgggtctcattgggtta
caaggagaatcaggaagccctggacagccgggttctactggaccaatgggtcccatgggt
cttactggtgatcgaggtcccaaaggtgaagctggtattcgcggcgttgatggaccacaa
ggacccaaaggaaggccaggtctacctggaatcgaaggagttaagggtgatcgtggattc
gagggtccaaaaggatctaagggacaccggggcttgatgggacttcaaggtttacctgga
atgccgggtgctattggagaaaaaggaattattgggatacctggattagccggcaaagat
ggcatcccagggttaagaggtccgcctggccgggatggtaatccagggccaatagggctc
gctggaaatcccggttcaccaggagttgctggtgaagatggacgacaaggactcccagga
cctgtgggacctataggaccgcctgggccgcccggagaagggaatttcggatacgatgcg
gcttccttggccgctttgatgatgcagggacagagtaaagggcctgatggtatggtagga
gacgcgccttttaggctctttggtaaggagatgagcaaagatgagcagaatgagcttcta
atgaaagcttatgaacatttgaagtcaacatttaaaaatgccattcagcctgatggaaat
gaaaatgctcctgcacgaacgtgtcgtgatttatttattgcatatccggacaaaccatca
ggtgagtattgggtcgatccaaatgggggcgatatccgcgacgctattctcgttcattgt
gatgttaataaacgcgcaacttgtatctttgtgagtccatcgaaaaccaaagagatcaat
catatagacaatcacaattatcatggtaatggaatttggctcagtgaaataacggatgga
attaaggtatcttataaagcggatagcaatcaaatcggatttctacaattattgtcgatt
catgcggagcagaatttgacgtatcattgtaaaaatagcgttgctttttatgacgaggaa
cataagacatacaggcgtggattgaaattactcgcgtggaatgatgttgaattaacacca
aagggtaatcatcgactacgatatgatgtaacagtggatggatgtaaggcacgatcaaac
gagtggtcgacaaccgaactttcatacaccacggataaaccaacacggctaccttttgtt
gacattggtttgagagacattggtaaatctgaacaaagattttggatcgagttcgattct
gtctgttattattaa
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integrated database retrieval system