Fopius arisanus: 105272370
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Entry
105272370 CDS
T07645
Name
(RefSeq) probable ATP-dependent RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
fas
Fopius arisanus
Brite
KEGG Orthology (KO) [BR:
fas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fas03041
]
105272370
Enzymes [BR:
fas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105272370
Spliceosome [BR:
fas03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105272370
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
OB_NTP_bind
R3H
Helicase_C
DEAD
Ank_2
nSTAND3
Ank
AAA_19
HA2_N
AAA_22
Ank_5
Ank_4
ATPase
PhoH
NPHP3_N
Ank_3
T2SSE
SRP54
Motif
Other DBs
NCBI-GeneID:
105272370
NCBI-ProteinID:
XP_011312776
UniProt:
A0A0C9PKA5
LinkDB
All DBs
Position
Unknown
AA seq
1153 aa
AA seq
DB search
MPRRKNHQRKVAIGEDTRIAVNLTVKKLLETHDQKELEFPSSYTAEERAYIHQLAAQLGL
KSKSRGKGANRFMTVYKREGSTIIQSDATIKLNKISKQSLVNLLEKFPLNNKERQDLLPP
TERERTMDSGITTNTKAMGRLNSSIALVPQLRTNQALVQSRKSLPVYTARDKILEALSSN
QVLIIAGETGSGKTTQVPQYILEYCQQKNQACRIICTQPRRLSAVSVAERVAFERDEKIG
QTFGYQIRLESRVAPKTLLTYCTNGVLLRTLMGGDAALTTITHIIVDEVHERDRFCDFLL
IALKEALVKYRSLKLILMSATMDTNIFVKYFTHCSIINVPGRCHDVDVYFLEDVLKITGY
TTAKMLEKREELINKKEQRKVLESWTQYTPQQNKAPGRGKVTVATPILGQQSVPQPERVK
LEPWLREEVDKSISDAWLIGGDDNFAQLLHLILSENISVDYQHSSTLVTPLMVAAGRGCI
NTTEQLLNLGANINIRSSNEWTALDWAKKMNQIECAELIEAYLKTYDCRIEDSGVQNIDA
PLSEDKFLLDIYHNTFNDDNVNYDLAFNLIHYIHTKQPPGAILVFLPGYDDIVMLRDRIN
NEEKIMNQNMICDLFVLHSNMQTSDQKRVFRPSPTGCRKIILSTNITETSITIDDVVYVI
DSGKVKEKSFDALCGVCTLRSNWISQSCAKQRKGRAGRCQKGICYRLFSSTRYNSLQVYP
IPEILRLPLQELCLFTKHLAPGNTPIAEYLERALEPPSNVVTRNAVQLLKSIDALDAWED
LTELGTHLLDLPVEPRLGKMLLYAVVLKCLDPILTIVCSLAYKDPFFLPSQPSQKRAATA
VRKTFAGGSYSDHMAVLRAFQFWQHARSSGWEKKFCEKNFISSAVMEMITGMRSQLLGQL
RASGFVRARGPGDIRDLNWNSENWAVVKAALTAGLYPNLIRVDREHGQLRTQKESKVCFH
PSSTLKEFSKSTRTTSAQSHSATVNTLPSDWLIYEEMSRVGRFCHVKTVTVVTPITVALF
SGPARLTMDTICETEAVPESESDSEVEETREGMTILKLDDWTVFKLEFEVAKLVLHLRQK
WNALFLRRMKNPTRSMTALDDQVIKTMVAIISAEEQNCEIPQPAGIGQRPRPLIVDYYPA
NARRNEDTDDRAP
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggcgcaagaatcaccaaaggaaagtcgccataggggaagacacaaggatagct
gtcaacttgacagtgaaaaaactactggaaactcacgatcagaaagagctggagtttccc
tcgtcatacacagcagaagaaagagcttatatccatcaattggcagctcaacttgggctc
aagtccaagagtcgaggtaaaggggcgaatcggttcatgacagtctacaaacgcgagggc
tcgacgatcatccagtcagacgccaccataaaactgaacaaaatttccaagcaatccctg
gtaaatctcctggagaaattccctctgaacaataaagagagacaagatttgctgccgcca
actgagcgagaacggacaatggacagtggaataacgacgaacactaaagcgatgggaaga
ttgaacagttcaattgccctagtacctcaactgcgtacgaaccaggccctcgtgcaatcg
aggaagagccttccagtgtacacagctcgggataaaattctcgaagccctatcgtccaat
caagtactcataatcgctggtgagacaggttcaggaaaaactactcaagtaccccagtat
attctggagtactgccagcagaaaaatcaggcctgcaggataatttgcacgcaacccaga
agactgtcagctgtctcagttgctgaaagagttgcctttgagcgtgacgaaaaaattggc
cagacatttggataccaaataagactggagagtcgagttgcccccaagactctcctgact
tactgtacaaatggagttctcctgaggacgttgatgggtggtgatgcagctctgacaaca
ataactcacataatcgttgatgaggtgcacgaacgtgatcgattttgtgattttcttctg
atagcattgaaggaggcactcgtaaagtacagatcactgaagctaattctgatgagtgct
acaatggacacaaatatcttcgtcaagtatttcacccattgcagcattataaacgttcct
gggcggtgtcacgacgtcgatgtttacttcttggaggatgttctcaagattacgggatac
acaactgccaaaatgctggagaagagagaggagttgatcaataaaaaggagcagagaaaa
gtcctagagtcgtggacacagtacaccccacagcagaataaggcgccggggcgtggaaaa
gttacagtggccacgccaatcctgggacaacagtctgtaccacagcctgagagggtgaag
cttgagccctggttgagggaggaggtggacaagagcatctcagatgcttggctcatcggt
ggtgatgataattttgctcaactccttcacctcattctctctgaaaacatctctgtggat
taccaacacagcagcaccctcgtgacacccctgatggtcgctgcaggtagaggttgcatc
aacaccactgaacaattactcaatcttggagctaacataaatattcgaagtagcaacgag
tggacagccctcgactgggcgaagaagatgaatcagatcgagtgcgctgagctcatcgag
gcttatctcaagacttatgactgtagaatcgaagactctggagttcaaaatatcgatgca
ccactctctgaggacaaattccttctggacatttaccataatactttcaacgacgacaac
gtcaactacgatcttgcattcaatctgattcattatattcacacaaaacaacccccagga
gcaattctagtatttctcccaggttacgatgacatcgtcatgttgcgagatagaataaac
aacgaggagaaaattatgaatcaaaatatgatctgtgatctatttgtccttcactctaac
atgcagacgtcagatcagaaacgagtgtttcgtccaagtcccactggctgtcgaaaaatc
attctctccacaaatattactgaaactagtatcacgattgatgacgttgtttacgtcatt
gactctggaaaagtgaaggagaaatcgttcgatgcactctgcggtgtttgcacattgaga
tcaaactggatatcccagagttgtgctaaacagaggaaaggaagagctgggagatgtcag
aaaggtatttgttacaggctcttctcatctaccagatacaacagcctgcaggtgtaccca
ataccagagatcctcaggttgccactacaggagctgtgtctcttcactaaacatctcgcc
ccaggcaataccccaattgctgaataccttgaaagagccttggagcctccctccaacgtt
gtcacgagaaatgctgtacaattgttaaaatccattgatgctcttgatgcttgggaggac
ctcacagagttgggaacacaccttttggatctgccagttgagcccagacttggaaagatg
ctgctttatgctgttgttctcaagtgtctcgatccaattctcacgatagtctgcagtctg
gcctacaaagatccatttttcctcccctcccagccctcccagaaacgtgcagcaacggct
gtgaggaagacattcgctggtggctcttattcagatcacatggcagttctcagggccttt
caattctggcagcacgccaggtcttctgggtgggagaaaaaattctgcgaaaagaatttc
atatcctcagctgtcatggagatgatcactgggatgaggtctcagctgctgggacagctc
agggcctctggatttgtgagagcaaggggtcctggtgatatcagggatctcaattggaat
tctgagaattgggctgttgtcaaggctgctctaactgctggcttatatcccaatctcatt
agggtggacagggagcatggacagctgagaacccagaaggagagtaaggtctgctttcat
ccgtcatcgacactcaaggagttctctaaatcaactagaaccacttcagctcaatcacat
tctgctactgttaatactctaccctctgactggcttatttacgaggaaatgagcagagtt
ggaagattttgtcacgttaaaactgtcactgttgtcacaccaatcactgttgccttgttt
agtggtcctgctaggcttacaatggacaccatctgcgaaactgaggcagtccctgagagt
gaatctgattctgaggttgaggagacaagggagggcatgacaattttaaaattagacgac
tggactgtattcaagttggagtttgaagttgccaaacttgttctccatctcaggcagaag
tggaatgcacttttcttgaggagaatgaaaaatcccactaggagtatgactgcactcgat
gatcaggttataaagaccatggttgctattatttctgctgaggaacagaactgtgaaata
ccacaacctgctggtattggacagaggcccagaccactcatcgtcgattattatcctgcc
aatgccaggagaaatgaggatactgatgacagggccccctag
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