Fopius arisanus: 105272458
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Entry
105272458 CDS
T07645
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
fas
Fopius arisanus
Pathway
fas03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fas00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105272458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fas03021
]
105272458
03019 Messenger RNA biogenesis [BR:
fas03019
]
105272458
Transcription machinery [BR:
fas03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105272458
Messenger RNA biogenesis [BR:
fas03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
105272458
U7-dependent histone pre-mRNA processing factors
105272458
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
HEAT_2
GNC1_N
KCTD11_21_C
Motif
Other DBs
NCBI-GeneID:
105272458
NCBI-ProteinID:
XP_011312911
UniProt:
A0A0C9RXC3
LinkDB
All DBs
Position
Unknown
AA seq
1121 aa
AA seq
DB search
MPNSHHKISMDPRLKKKIEPERGSNDMVVDWLNEASMTNNDTIKIANLSKLQEILINKDI
DLLDSYLEEVLQFSLDKNSEVRKTICSFIEEAGDKRPEAIPRMLQTLLRLVSDDAPVVTK
RALRTCGKILRAALKWVSSAAVVTLEMETAWGQLSDLKSQIINMIDSDNDGIRTQAVKFL
EGVVLLQTYPDPDSPRKPDDFSLEDIPLTLKIARRRKLEEEANHVMELLIKFHGSPHVSS
LNLMTCMGSLALIAKTRPQFMSNVIAALQRLQNDLPPTLSDSQVTSVQKHLKLTLLNLMK
HPASIEFAPTIAKQLTQLGAKEQEIMKAYPKAEDIRRMKKRQQESSLSNASKRVKLDSII
PPSEDSESLPATALPVKLPELIELSESFIADRLSVEIATELVMDSMAWVPDTMTSIFQRE
YVPNATTDTSIQRQTISKLLAAQIKQAKAKKTKKDLKEEDAVMEDLIKNPTITVAEAKRE
RKREKDREKEKEAKATLEAEKNLAKTRNRMRVLKLNEVAKPLSKDTKEKMLLMAVNRILK
AEMSAVFGGVAGVRSKILTTLAATFNPYIKEAILRYITEEMRTRLDLALGWLYEEYALLQ
GFQRRTTLGTKPHEAPHQAYNFLLCTLISAIDEIQGKDRDPLLARLYLEAPLITEDAVEA
LKSVSSEEKRGLAPLVLLKDLVIMRPTKQLTFLNVLLCHTGHEKKMIRDSAISLVVELYE
RPELTKFIEEYTVLYLGFLRLQNPPEIVFGKDRGREQVEEQWSESTTRACLELYLAVLGK
HQDLIHELAKVYSSMGADVKRIVLRLVEGPVRSLGMASPQLLKLVEMCPKGAETLVTRII
HILTEKAPPSVELVAKVRDLYQTRVSDVRFLIPVLNGLSKKEVVAALPKLIKLNPIVVKE
VFNRLLGTHNNESGVPHTSPVTPAELLIALHTIDPSKAELKTVIKATSLCFAEKQVYTQE
TLAVVMQHLMELNPLPTLLMRTVIQSLSLYPRLSGFVMNILQRLILKQVWKQPKVWEGFV
KCCERTQPQSFAVILQLPPQQLGEALNMAPGLKGPLLAHVEAFAENQKAHVPQSIMDVIQ
GKQTVDMHDDFDIAPPGEYPPEQRIETMDVDLSEPAPPGLD
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgcctaatagccaccataaaatatccatggatccccgtctgaagaagaagattgagccg
gagagaggctctaacgacatggttgtggattggctgaacgaggcgtcaatgacgaacaac
gacacgatcaagattgcaaacctgtcgaaactccaggaaatcctcataaataaggacatc
gatctgttggattcctacctggaggaagtcctgcagttctctctggacaagaactcagaa
gtcaggaaaaccatttgcagctttatcgaggaagcaggagacaaacgtccagaggcaatt
cctcgaatgctccaaaccctcttgagattagtgtcagacgatgccccagtggtgaccaaa
cgtgcactccgaacctgtggaaagattcttcgagcagccctgaaatgggtatcgagtgct
gctgttgtcaccctggagatggagacagcttggggacagttgagtgacctgaagagccag
ataatcaatatgatagacagcgacaacgatggaatccgaactcaggcagttaaatttctg
gagggagtggtgctccttcagacataccctgacccagactccccacgaaagccggatgat
ttttccctggaggatattccccttactttaaaaatagcgagaaggagaaaattagaagag
gaagcaaaccacgtaatggaattattgataaaattccacggttccccccacgtcagcagc
ttgaatttgatgacctgcatgggcagtctcgctctcatcgccaagacacgtccccagttc
atgtccaacgtcatcgcagccctccaacgtcttcagaatgacctgccccccacattgtcc
gactcccaggtgacgagtgtccagaagcacttgaagttgacgttattgaacctgatgaag
cacccagccagcatcgaatttgcccccactattgccaaacagctaacacaactgggagcc
aaagagcaggagatcatgaaggcctatcccaaggctgaggacattcgaaggatgaaaaag
cggcagcaagagtcctccctcagtaatgcctcaaaaagagtcaaactcgactcgataatt
cccccttccgaggactcagaatctctcccagctactgccctaccagtgaagctaccagag
ctaatagaactttcagaatccttcatcgctgataggttgagcgttgaaatagccacagag
cttgtcatggacagcatggcctgggtgccagataccatgacttcaatattccaacgtgaa
tatgtccccaatgccaccactgacaccagcattcagcgtcagacgatctccaagcttctg
gcagctcagataaaacaggctaaagctaaaaaaacgaaaaaggatctcaaagaagaggac
gctgtgatggaggatttaataaagaatccaacaattacagtagctgaggccaaacgcgag
aggaaacgagagaaagacagggagaaggagaaagaagctaaagccactctagaagctgaa
aagaatctggccaaaactaggaacagaatgagggttttgaaattgaatgaggtggcaaaa
cctttgtcaaaggacaccaaagagaagatgctgctgatggcagtgaatagaattctcaag
gctgagatgagtgctgtatttggtggagttgctggagtcagatctaaaattcttaccaca
ttagctgcaacattcaatccttacatcaaggaagctattcttcgttacataactgaagaa
atgagaacacgattggatctagcactgggttggctgtacgaggagtatgccctgctgcag
ggattccagaggagaacaactctggggacaaaaccccacgaggcacctcatcaagcctat
aatttcctcttgtgtaccttaatttcagctattgatgagatccaggggaaagatcgagat
cctctactggcacgattatacctggaagctcctctcataacggaggatgctgtcgaagcc
ctaaagagcgtctcttccgaggaaaaaaggggcttagctcctttagttctcctcaaggat
ctcgttatcatgaggcctacgaaacaattgacttttttgaatgttcttctctgccatacg
gggcacgaaaagaaaatgattcgggattcagctattagtctggttgttgaattgtacgag
agaccagaattaacaaaattcattgaggagtacacggttctttacctgggattcttgaga
ttgcagaatccaccggaaatcgtttttggaaaggatcgggggagggagcaggtggaggag
cagtggtcagagtcgacaaccagagcctgtttggagctctatttagctgttctcggtaaa
catcaggatttgatccatgagttagcgaaagtttactcgtcgatgggggcggatgtaaag
aggatagtcctgagactggttgagggtccagtgagatccctaggaatggccagtcctcag
ttgctgaagctcgtagagatgtgtcccaagggggctgagaccctcgtcaccaggataatc
catattttaaccgaaaaagcaccacccagtgttgagctcgttgctaaagtcagggatttg
tatcagacacgcgtgtctgacgtgcgatttctcattcctgtgctgaatgggctctcgaag
aaagaggtagtagcagcactaccgaaacttattaaactcaatcccattgttgtgaaagaa
gtgtttaatcgactccttggaactcacaacaatgagagtggagttcctcatacgtcacca
gtgactccagctgagttgctcattgcactgcatacaattgatccgagcaaagccgagttg
aagactgttattaaagctacgtctttatgcttcgctgaaaaacaagtttacactcaggag
acactggctgtggtgatgcagcatcttatggagctcaatcccctgcctacactattgatg
agaacagttatacagagtttgtcgttgtatccgaggctcagtggatttgtcatgaatatt
ctgcagagattaattctcaagcaagtgtggaagcaacccaaggtatgggagggctttgtt
aaatgttgtgaacgcactcagccacagagtttcgctgtgatcctgcaattaccacctcag
caattgggggaggcactcaatatggcaccggggctgaaaggaccattgctcgcccatgtt
gaggcatttgctgagaatcaaaaagctcacgttccacaatcgataatggacgtcatccaa
ggaaaacaaacagtggatatgcacgacgactttgatattgcaccaccaggagaatatcca
ccagagcaaagaatagaaaccatggatgttgatttatccgaaccagccccgccagggtta
gattaa
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integrated database retrieval system