Fopius arisanus: 105273967
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Entry
105273967 CDS
T07645
Name
(RefSeq) collagen alpha-1(IX) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
fas
Fopius arisanus
Brite
KEGG Orthology (KO) [BR:
fas00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fas04147
]
105273967
00535 Proteoglycans [BR:
fas00535
]
105273967
00536 Glycosaminoglycan binding proteins [BR:
fas00536
]
105273967
Exosome [BR:
fas04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105273967
Proteoglycans [BR:
fas00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
105273967
Glycosaminoglycan binding proteins [BR:
fas00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105273967
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
105273967
NCBI-ProteinID:
XP_011315026
UniProt:
A0A9R1UAI5
LinkDB
All DBs
Position
Unknown
AA seq
1139 aa
AA seq
DB search
MLLSFRVVLLISAVLSSWRARADYLSDKNEVYDLLSAAVLTTEDKNQYVDDGVDGFLAFG
FRPGSEVKQPYRLCLPEKLSGEFTIVATFKPMSLRTSYLFAVLNPFDTIVQLGLRITDGP
SPNQNVSLIYTNSDEHSHSEEIAQFTVTKLTRKWSKIVIRVSTTDVALYLNCHEVARQRV
TRIPQELVFDTASALYIAQAGPHIQEKYDGLLQTLRLYSGLPQDLVRCSDIELFPTHAGS
GDYSDPLEGGLLDFDKFEQGEDNDKNENNPPPFITPPPPNPDGRGLKGEKGDKGERGESV
RGSPGPPGPPGNLYDLNDDAKRIQPQGPPGPKGEPGTCTCNATDLRMNFMMPKMIEGPKG
EPGVSGKEGKQGDRGLTGSAGPPGERGLPGSAGPKGDRGELGMTGPEGPQGQKGEPGRDG
IAGEKGNPGPPGPPGKADDFSPHDPLWIRTGMSPVSREGITMRPGLPGQKGDAGMPGHPG
PKGESGITGSKGTKGEPGLKGTKGDHGKDGSRGVQGFKGEPGAPGTPGFPGAPGENGRPA
EKGDKGDSGPEGKQGPPGPSGHVNFGTGGLAGSGTGNGEKGERGESGPRGFKGDLGTKGE
KGNKGDSGPSGLPGINGVQGPQGDKGEPGRDGSAGVPGTGGSKGDRGERGPPGATTIAGS
GDYVTIKGEKGTEGKRGRRGRPGPPGPPGKSGSAGEIGLPGWPHNSYKGRAGTLGIPRSP
GPVGPKGDKGESCLVNECSSGSGMKGEKGADGFPGAPGRDGQRGLPGPPGPPGISLIGQK
GEPGIGRNHMFGERDYYGPRQGARSSLDELKVIRELKQLKELKEHLGAGKPPTRGAHEVT
TKIVPGAVTFQNSDAMTKMSSVSSVGTLAYIIDEEALLVRVNHGWQYIALGSLLPITTVP
PPTTVLPPTNPPFEASNLINQIPMKTDGTGWYPKMLRMAALNEPISGDMHGVRGADYACY
RQARRAGLRGTFRAFLSSRVQNVDSIVRLDDRDLPIVNIKGDVLFNSWKEMFNGHGAYFS
QNPRIYSFNGKNILADLAWPEKIVWHGSHKFGDRAMDTYCDAWHSGNSDRYGLGSPITAG
RLLEQVRYSCDNKFALLCIEVTSESARRRRSINDNIDNSDNDDLSEQEYQNYLDHITNN
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgctacttagtttcagagtggtactgctgatctcagctgtcctgtcctcttggcgagca
cgagctgactatctcagtgacaaaaatgaggtgtacgatttattatcagctgcggtactg
acgactgaggataagaatcagtatgtcgatgatggagttgatggtttcctggcatttgga
ttccgtccaggatcagaagtcaagcagccctatcgtctgtgtctaccagaaaaattatcc
ggtgaattcaccattgtagcgactttcaagcctatgtctctgaggaccagctatctgttc
gccgttctcaatcccttcgatacaattgtccagctgggacttcgcatcaccgatggaccg
agcccaaatcaaaatgtctcactgatttacaccaactccgatgagcactcacactcggag
gaaatagctcaattcacagtgacaaaattaacaaggaaatggtcaaaaatagtcatcaga
gtgtcaaccactgacgttgcactttacctaaactgtcatgaagtagcgagacagcgagtc
accagaattccccaggaactcgtattcgatactgcaagtgcactctacattgctcaagcc
ggacctcacattcaggaaaaatatgatggtctcctgcaaacgttgagattatattccggg
ctgccccaggacctcgttagatgttctgatattgagttgttcccaacacacgcgggctca
ggtgactattctgacccattggagggtggactccttgactttgataagttcgaacaaggc
gaagataatgacaaaaatgagaataaccctccaccattcattacaccaccgccgccaaat
cctgatgggagaggattgaagggtgaaaagggtgataagggtgaaaggggcgagagtgtg
cggggttcaccggggccaccaggtccccccggaaatctgtacgatttaaatgacgatgcc
aagcgaattcagccacaaggaccaccgggaccgaagggtgaacctggaacatgcacttgt
aatgcaaccgatttgagaatgaacttcatgatgccaaaaatgattgaagggccaaaggga
gagcctggcgtatccggtaaagaaggaaaacagggtgaccgcggtttaacgggatcagcg
gggccacctggtgagcgaggtttacctggttcagcgggacccaaaggtgacagaggtgag
cttggtatgacaggaccagaagggccacagggacaaaagggtgagccgggtagagatggt
atagctggggaaaagggaaatcccggaccgccagggccaccaggcaaagctgatgacttc
tctcctcacgatcccctttggattagaacaggcatgtctcctgtatctagagagggtatc
acgatgaggccgggattaccagggcaaaagggggatgctggaatgcccggccatcctgga
ccgaaaggcgaaagtggaatcacgggatcaaaagggacgaaaggagaaccgggattgaaa
ggcactaaaggagatcatgggaaggatgggagtcgtggagttcaagggtttaagggtgaa
ccgggagcaccaggtacacccggatttcctggagcacccggtgaaaatggtagacctgcc
gaaaagggagataaaggagattctggccctgaaggcaaacagggacctccgggtccatcc
ggacacgtcaactttggcacaggaggactagctggaagtggaacaggtaacggtgagaaa
ggtgaaagaggagagtcagggcctcgtggatttaaaggcgacctcggtaccaagggtgaa
aaggggaataagggtgacagtggaccatctgggcttccaggaataaatggtgtacagggt
ccccaaggtgataaaggagagcctggaagagatggttccgctggagtgccaggaacagga
ggatctaaaggagatcgaggcgaacgaggacctcccggtgccacgacaattgccggctcc
ggtgactacgttacgatcaaaggagaaaaaggaactgaggggaagagaggtagaagaggt
agaccaggtcccccaggaccaccaggaaaatccggaagtgctggtgaaataggtcttcct
ggatggccgcacaattcgtacaagggacgagctggaacgcttggcattcccagaagtcca
ggaccagttggaccgaagggtgataaaggtgaaagctgcctagtgaacgaatgcagcagt
ggaagtggaatgaaaggagagaaaggagcggatggatttcctggtgctcctggccgggac
ggccaaagaggattaccaggtccacctggacctcctggaatatcacttattggtcaaaag
ggagagccgggaattggtcgtaaccacatgtttggagagagagattactacggccctcgt
cagggagcacgaagtagtctcgatgagctcaaagttattcgagaactcaagcaattgaaa
gaattgaaagagcatttaggcgctggaaaaccgccaactagaggagctcatgaagtcaca
acgaaaattgtaccgggagctgtgacatttcaaaattcggatgcaatgactaaaatgtcg
agtgtcagttcagtgggtacgttggcatatatcattgatgaagaagcattgctggttaga
gttaatcatggatggcagtatatagcgcttggatctctcttgccgataacaaccgtgcca
ccaccaaccactgtgctacctcctaccaatccacccttcgaggcttcaaatctaatcaat
caaatacccatgaagactgacggcaccgggtggtatccgaaaatgttgcgaatggcggct
ctcaatgaaccaataagtggtgatatgcatggcgtgagaggagcggattacgcgtgttat
cgacaagctagacgtgctggtttgaggggaaccttccgagcattcctaagttccagagta
caaaatgtcgatagtatagttagattagatgacagggatctgccaatagttaatatcaaa
ggagatgtgctgtttaactcatggaaggagatgttcaacgggcatggcgcgtacttctcc
caaaatcccagaatttacagtttcaacggtaaaaacatattagcggatttggcatggccg
gaaaagattgtttggcacggttcccacaaattcggtgaccgtgccatggacacttactgc
gacgcatggcactctggaaactctgatcgatatggattgggatcacctatcaccgctggc
agactcttggagcaagtacgttactcatgcgataacaaatttgcactgctgtgtatagaa
gttaccagtgaatcagcaagacgacgcagaagcatcaacgacaatatcgataacagcgat
aatgatgatttatccgagcaggagtatcagaattatctcgatcatattacaaataactaa
DBGET
integrated database retrieval system
