Fopius arisanus: 105274280
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Entry
105274280 CDS
T07645
Name
(RefSeq) putative ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
fas
Fopius arisanus
Pathway
fas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105274280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fas03019
]
105274280
03036 Chromosome and associated proteins [BR:
fas03036
]
105274280
Enzymes [BR:
fas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105274280
Messenger RNA biogenesis [BR:
fas03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
105274280
mRNA degradation factors
5'-3' decay
Decapping complex
105274280
Chromosome and associated proteins [BR:
fas03036
]
Eukaryotic type
Gene silencing
piRNA pathway
105274280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA
CMS1
AAA_22
DS
Motif
Other DBs
NCBI-GeneID:
105274280
NCBI-ProteinID:
XP_011315526
UniProt:
A0A0C9R3F6
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MMTETHMNSNHMLNSGLSSKSDLEKMDDVGWKAKLKIPPKDKRIKTSDVTDTRGNDFEEF
CLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDILARAKNGTGKTGAYSIPVLEQVDAK
KDVIQALVIVPTRELALQTSQICIELAKHMEVKVMVTTGGTNLRDDIMRIYQKVQVIIAT
PGRILDLMDKNVANMNHCRILVLDEADKLLSQDFKGMLDHVISRLPQERQILLYSATFPL
TVKQFMEKHLRDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQITQSIIFCN
STQRVELLAKKITDLGYCCYYIHAKMAQAHRNRVFHDFRAGLCRNLVSSDLFTRGIDVQA
VNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYEDRFNLHRIESELGTEIKPIPK
VIDPSLYVARPEDNNSMEEGNVSK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgaaacgcatatgaattccaatcacatgttgaattcgggtctgagcagtaag
tcagaccttgaaaagatggacgatgtgggctggaaagcaaaacttaaaattccaccaaag
gacaaacgcatcaagacaagtgatgtcacagacacacgtggtaacgatttcgaagaattc
tgcttgaagcgagaacttctgatgggaatatttgaaaagggatgggagaaaccatcacca
attcaagaagccagtataccaattgccctgtctggcaaagacattttggcacgtgccaag
aacggtacaggaaagactggagcttactcaatcccagtattggagcaggttgacgctaaa
aaagacgttatccaagcattagtcatagtgcctaccagagagttagcattgcaaacatct
caaatctgcattgagctcgctaaacacatggaggttaaggttatggtgaccactggtgga
actaatctgcgcgatgatattatgaggatttaccaaaaagttcaagtgatcattgcaaca
ccaggtcgtattctcgatctgatggacaaaaatgtcgccaacatgaatcactgcagaatt
ttggtactggacgaggctgacaaactcctatcacaagacttcaaaggcatgttggatcat
gttatttccagattaccacaggaacgacagatattgctgtattcagccacgttccctctg
actgttaaacaattcatggaaaaacacttgagagatccatacgagattaacttgatggag
gagttgacactaaagggtgtaacacagtactatgcctttgtccaagaacgccagaaggtt
cactgcctgaatacattattttcaaagctgcagataacacagagtattatattctgcaac
tcgacgcagcgtgttgaactgttggccaagaagatcacagatttgggctattgctgctat
tacattcatgctaagatggcacaagcacacagaaatcgtgtgttccatgattttcgcgct
ggtctatgccgaaatttggtaagcagtgacttgttcacgcgcggtattgacgtccaggct
gtgaacgttgtaataaactttgattttccaaaaatggctgagacctatctccatcgtatc
ggtcgctccggtagatttggccacttgggtatcgctatcaatcttataacctacgaggat
cgtttcaatctccatcgtatcgagtctgagcttggcactgagatcaagccaattcccaag
gtgatagatccaagcttatacgttgcaagaccagaggacaacaacagtatggaggaaggt
aatgtgtcgaagtag
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