Flavobacterium arcticum: DVK85_02135
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Entry
DVK85_02135 CDS
T05621
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fat
Flavobacterium arcticum
Brite
KEGG Orthology (KO) [BR:
fat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fat03009
]
DVK85_02135 (rimO)
Enzymes [BR:
fat01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DVK85_02135 (rimO)
Ribosome biogenesis [BR:
fat03009
]
Prokaryotic type
ribosomal protein modification factors
DVK85_02135 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AXG73089
UniProt:
A0A345H929
LinkDB
All DBs
Position
472895..474214
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AA seq
439 aa
AA seq
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MRTKSLKKNKINVITLGCSKNVYDSEVLMGQLKASGKEVTHEAPAEEEGNIIVINTCGFI
DNAKEESVNMILNYADKKDQGLVDKVFVTGCLSERYKPDLEKEIPNIDQYFGTTELPLLL
KALGADYKHELLGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGKHVSQPIEKLVKEA
EGLARNGVKELILIAQDLTYYGLDLYKKRNLAELLENLVKVEGIEWIRLHYAFPTGFPVD
VLDVMNRQPKVCNYIDIPLQHIADNVLKSMRRGTTQEKTTKLLKQFREAVPGMTIRTTLI
VGYPGETEEDYQTLKKWVEEMRFERLGCFTYSHEENTHAYNLVDDVPAEVKQQRANEIME
IQSQISWELNQEKIGETFRCIIDRKEGNHFVGRTEFDSPDVDNEVLIDATTTYLKTGEFV
NIKITDATEFDLYGTPVTE
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaaatcgttaaagaagaataagataaatgtaataacccttgggtgttccaaa
aacgtgtatgacagcgaagtactgatggggcaactgaaagccagcggtaaagaggttacc
cacgaagctcctgctgaggaagaaggaaacatcatcgtgataaacacttgtggttttata
gacaatgcaaaggaagagtcggtaaacatgatattgaattatgctgacaaaaaagaccaa
ggactggtagataaagtatttgttacaggatgtctttctgaacgctataaacccgattta
gaaaaagaaatacctaatatagatcagtatttcggtactactgagctgcctcttttactt
aaagcgcttggtgctgactataagcacgaacttttaggcgaaaggcttaccactacccca
aaaaattatgcatatttaaaaattgccgaaggttgcgaccgtccgtgtagtttttgtgcc
ataccacttatgcgtggtaaacacgtatcccaaccgatagaaaaactggttaaagaagcc
gaaggattagcgcgtaacggtgttaaagaattgatacttatagcacaagaccttacttat
tatggtcttgacctttataaaaaacgtaatcttgccgaactacttgaaaacttagtaaaa
gttgaaggtatagagtggatacgtctgcattatgcattccctacaggtttccctgtagat
gtactagatgtaatgaaccgccaacctaaggtgtgtaattatatagatattcctttacaa
catattgctgataacgtattaaaatcgatgcgtcgtggtactacgcaagaaaaaacaact
aagttgttaaaacaattccgtgaggctgtaccaggcatgacgatacgtactacacttatt
gtaggttaccctggtgaaacagaagaagattaccaaaccctgaaaaagtgggtagaggaa
atgcgttttgaacgtttgggttgctttacctattcgcatgaagaaaacactcacgcttat
aatcttgtagatgatgttcctgctgaagtaaaacaacagcgtgctaacgagattatggaa
atacagtcgcaaatatcatgggaactgaatcaagaaaaaataggcgaaacgttccgttgt
attatcgacagaaaagaaggtaatcattttgtgggtcgtaccgaatttgacagtcctgat
gtagataacgaagttctgatagacgctacaacaacttacctaaaaacaggcgaatttgta
aacataaaaattaccgacgctaccgagtttgacttatatggcactcccgttactgaatag
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