Flavobacterium arcticum: DVK85_04195
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Entry
DVK85_04195 CDS
T05621
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fat
Flavobacterium arcticum
Brite
KEGG Orthology (KO) [BR:
fat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fat03016
]
DVK85_04195 (truB)
Enzymes [BR:
fat01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DVK85_04195 (truB)
Transfer RNA biogenesis [BR:
fat03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DVK85_04195 (truB)
Prokaryotic type
DVK85_04195 (truB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PH_PKH3_C
PseudoU_synth_2
DNA_ligase_A_M
Motif
Other DBs
NCBI-ProteinID:
AXG73473
UniProt:
A0A345HA63
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All DBs
Position
922222..922914
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AA seq
230 aa
AA seq
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MTTPEAFTEGKILLIDKPLKWSSFQAVNKIKWSLKKHLGLKKIKVGHAGTLDPLATGLLI
VCTGKFTKRITELQGMEKEYTGTFHIGATTPSYDLETEVNATFPTEHIDENLIKETVSQF
LGEIDQKPPIFSAIKKDGKRLYEHARKGEEVEIASRKTTIYEFEIIRIALPEVDFRVVCS
KGTYIRSLAFDYGKALQSGAHLTVLRRTKIGEFSVDNAIDPEIFENEIEK
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
ttgacgacacccgaagcatttaccgaaggcaaaatattattaatagacaaacccttaaaa
tggagttcttttcaggctgttaataaaataaaatggagtttaaagaagcatttaggctta
aaaaaaataaaagtagggcacgcgggtacactcgaccctttggcgacaggactacttata
gtatgcactggtaaattcaccaaacgcatcaccgaattgcagggtatggagaaagagtac
acaggtacttttcatattggtgctacaacaccatcttacgacttagaaaccgaggttaat
gctactttccctaccgaacatatagatgagaacctcatcaaagaaactgtttcgcaattt
ttaggcgaaatagaccaaaaaccccctattttctcggctataaaaaaagatggtaaacga
ctgtatgaacatgctcgtaaaggcgaagaagtagaaattgcttcacgcaaaaccacaata
tacgagtttgaaattatccgcatagcattacccgaagttgactttagagtagtgtgtagc
aaaggtacttacattcgctctttagcttttgattatggtaaagcattacaatctggcgca
caccttacagtactgcgacgcactaaaattggagaattttccgttgataatgctatagat
cctgaaatttttgagaatgaaattgaaaagtaa
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