Flavobacterium arcticum: DVK85_08905
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Entry
DVK85_08905 CDS
T05621
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fat
Flavobacterium arcticum
Pathway
fat03030
DNA replication
fat03430
Mismatch repair
fat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DVK85_08905
03430 Mismatch repair
DVK85_08905
03440 Homologous recombination
DVK85_08905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fat03032
]
DVK85_08905
03400 DNA repair and recombination proteins [BR:
fat03400
]
DVK85_08905
Enzymes [BR:
fat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DVK85_08905
DNA replication proteins [BR:
fat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DVK85_08905
DNA repair and recombination proteins [BR:
fat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DVK85_08905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
DNA_pol_A_exo1
GIY_YIG_2
RNase_H_2
Rv2179c-like
T5orf172
Motif
Other DBs
NCBI-ProteinID:
AXG74342
UniProt:
A0A345HCN2
LinkDB
All DBs
Position
complement(1980231..1981595)
Genome browser
AA seq
454 aa
AA seq
DB search
MYAILDIETTGGQYNEEGITEIAIYKYDGHEIVDQFISLVNPEKPIQPFVVKLTGINNAM
LRTAPKFYDVAKRIVEITEGCIIVAHNAQFDYRILRTEFERLGYNFERQSLCTVELSQRL
MPEQKSHSLGKLVRALGIPMSDRHRATGDALATIQLFKMLLAKDVEKEIIKGLIKSNVQK
DLEPKLFDLLGDIPSVTGLYYIYKENGDLIYIGKSNNIKKRLNQHFTGTSRKSKRLQRDV
FTIKYEETGSELIALLKECQEIKANKPAQNRALKKTVFPYSLYTEKNKEGYICFTVKKTD
GRKKEIISFASTNEAKNALFKIVDKYKLCQKLSGLDTTAKSACFPYKLGNCNGACIGIET
PKEYNQRATEFINHNSFNHQNMIIIDKGRTIEEHSAVLIEKGVYKGYAFFNLNYQVTNPE
ILKNIIVPMEHNRDIKNIIQGYLRRKRNLKIVHF
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcaatacttgatatagaaactactggcggacagtataatgaagaaggaataaca
gagattgccatatataaatatgacggacatgaaatagttgatcagtttataagcctcgtt
aaccctgagaaacccatacaaccatttgtagtaaaacttactggcattaataatgccatg
ctacgtactgcgcctaaattttatgatgtagcaaagcgaatagtcgaaattactgaaggc
tgtattattgtagctcacaatgcacaatttgactatagaatactccgtacagagtttgaa
cgacttggttataatttcgaaagacaatcgttatgtactgtagagctttcacaaagatta
atgcccgaacaaaaatcacatagcctaggcaaactggtacgtgcattaggcatacctatg
agcgacaggcaccgcgctacaggtgatgcgttggcaacaattcagctttttaaaatgctc
ttggcaaaagatgtcgaaaaagagattataaaagggctgataaaatcaaacgtacaaaaa
gatcttgagccaaaactctttgatttattaggcgacattccttctgtaacagggctgtat
tacatctataaagaaaatggcgatcttatatatattggtaaaagcaataacattaaaaaa
aggctcaaccagcattttacaggtacatctcgtaagtcaaaaagattacagcgcgatgtg
tttaccataaagtatgaagaaacaggtagtgaactgatagcattgcttaaggagtgtcag
gaaattaaagctaataagcctgcacaaaacagagcgttaaaaaaaacggttttcccctac
tcattatataccgagaaaaacaaagaaggctacatttgctttactgtaaagaaaacagat
ggcagaaaaaaagaaattatatcatttgccagtactaatgaggcaaaaaatgctttgttc
aaaatagtggacaaatacaaattatgtcaaaaactaagcggacttgatactactgcaaaa
tcagcttgtttcccctataaattaggtaattgcaatggtgcttgcattggcatagaaaca
cccaaagaatataatcaacgtgctacagaatttatcaatcacaacagttttaatcatcaa
aacatgattattatagataaaggacgaactatagaggaacatagtgctgtacttatagaa
aaaggtgtttataaaggttatgctttttttaatcttaattatcaagtaactaatcccgaa
atattaaaaaatattattgtccctatggaacataacagggatataaaaaacattatacaa
ggttacctaaggagaaaacgaaatttaaaaatagttcatttttaa
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