Flavobacterium arcticum: DVK85_09600
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Entry
DVK85_09600 CDS
T05621
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
fat
Flavobacterium arcticum
Brite
KEGG Orthology (KO) [BR:
fat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fat01002
]
DVK85_09600
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fat01011
]
DVK85_09600
Peptidases and inhibitors [BR:
fat01002
]
Cysteine peptidases
Family C82
DVK85_09600
Peptidoglycan biosynthesis and degradation proteins [BR:
fat01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
DVK85_09600
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AXG75274
UniProt:
A0A345HFB4
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All DBs
Position
complement(2140671..2142245)
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AA seq
524 aa
AA seq
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MIKLQKIFPLIILSVFFIITSCKKNENKNNLADVEVHEEDKVIPIDTTKFDVFFKTYPLF
KAYEKEIKELYKKHDHFIWQDKDGFIEFAQVLYNQTHQLDEEGVKMDMPYNDVISNIFYS
DTKKEPELDTELLISSMYFYYTSKVYAGLDEEASKETGWYLPRERTSYIAYLDTLMIDPQ
LIKEDKSEFFKQYYNLKKGLKKYRNIEEKGGWGTITLEKGVVIKPGDSATAVAQLRERLY
KEGYLKDNNENNIYDEELVSAVSNYNTKHNREGENNITSSLVKELNISVEERIKTISVNM
ERCRWITPKINTAKEYIAVNIPSYRLHYFQDGKPELISRVVVGKELNKTVVFSGEMSYIA
FSPYWNIPKSILENEIKPKIAKDDNYLAKHNMEWVGNRVRQKPGGNNSLGLVKFMFPNSN
NIYLHDTPAKSLFNKDERAFSHGCVRVEKARELAIAITKKHGDWNEDKVDKAMHASKENI
FNIKDKIPVYIAYFTAWADKDGNVAFYDDIYNRDERLAHLLYKS
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgattaaattgcaaaaaatatttcctttgataattttaagtgttttttttataataact
tcttgtaaaaaaaatgaaaataaaaataatctagccgatgtagaagtacatgaagaggat
aaggttatacctattgatactacaaagtttgatgttttttttaaaacataccctctattt
aaagcgtatgaaaaagagataaaagaactatataaaaaacacgatcattttatttggcaa
gataaagatgggtttatagaatttgcgcaggtattatataaccaaacccatcaactagat
gaagaaggggttaaaatggatatgccttataatgatgttatcagtaatatattttatagt
gatacaaaaaaagagccagaacttgataccgaacttttaataagttctatgtatttttat
tatacttcaaaagtatatgcaggtcttgatgaagaagctagtaaggaaacggggtggtac
ttaccaagagagcgaacatcttatattgcatacttagatacattaatgattgatcctcaa
ttaataaaagaagataaatctgaattttttaagcagtattacaacctaaaaaaaggactt
aaaaaatatcgaaatatagaagagaaaggtggatggggtactattacactagaaaaaggc
gtagttattaaacctggcgattcagcaacagcagtagcacaacttagagaacgtctttat
aaagaaggttatctaaaagacaataatgaaaataatatttatgacgaagagcttgttagt
gcagtaagtaattataatactaaacataatagagaaggagaaaacaatattacatcatca
ttagttaaagaacttaatatatctgtagaagaacgtattaaaaccatatctgtcaatatg
gagcgttgccgatggataactcctaaaattaatactgcaaaagaatatatagcggtaaac
attccttcttataggttacattattttcaagatggtaagccagaacttatatcgagagta
gtagtaggtaaggaacttaataaaacagtcgtatttagcggagagatgagctatattgct
tttagcccttactggaatatacctaaaagtattttagaaaatgaaattaaacctaaaata
gcaaaagatgataattaccttgcaaagcataatatggaatgggtaggtaatagagtaaga
caaaaacccggaggcaacaactctttagggttagtaaagtttatgtttcctaactctaac
aatatttacctgcatgacacacctgccaaaagcctatttaacaaagatgaaagagcattt
agtcatggttgtgtacgtgtagaaaaagcacgtgaactagctatagcaattactaaaaag
catggcgactggaacgaagacaaagttgataaagcaatgcatgcaagcaaagaaaatata
tttaatattaaagataaaatacctgtatatatcgcctattttaccgcatgggcagataag
gatggtaatgtagctttttatgacgatatatataaccgtgatgaaagacttgctcatcta
ctatataaatcctaa
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