Flavobacterium arcticum: DVK85_10495
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Entry
DVK85_10495 CDS
T05621
Name
(GenBank) ATP-dependent helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
fat
Flavobacterium arcticum
Pathway
fat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DVK85_10495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fat03019
]
DVK85_10495
03009 Ribosome biogenesis [BR:
fat03009
]
DVK85_10495
Enzymes [BR:
fat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DVK85_10495
Messenger RNA biogenesis [BR:
fat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DVK85_10495
Ribosome biogenesis [BR:
fat03009
]
Prokaryotic type
rRNA helicases
DVK85_10495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_22
MatB
Motif
Other DBs
NCBI-ProteinID:
AXG74636
UniProt:
A0A345HDH6
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All DBs
Position
2324310..2326097
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AA seq
595 aa
AA seq
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MNKFEQLGLNESLLKAINDLGFENPSEVQEKAIPLLLEKDTDIVALAQTGTGKTAAFGFP
LIQKIDPENRNTQALILSPTRELCLQITNEIKLYAKYVKGLHTVAVYGGASITDQAREIK
RGAQIIVATPGRMQDMINRGLVNISKIDYCILDEADEMLNMGFYEDIVSILSTSPENKST
WLFSATMPQEVSRIAKEFMRKPLEITVGHKNSGSSTVSHEFYLVNARDRFEALKRLADAN
PDIFSVVFCRTKRDTQAVAEKLIDSGYNAAALHGDLSQAQRDSVMKSFRNRQIQMLVATD
VAARGIDVDNITHVINYQLPDEIETYNHRSGRTGRAGKLGTSIVIITKSELRKITSIERI
IKQKFEEKTIPSGMEICEIQLFHLANRIKDVEVDHEINSYLPAIYEVMKDLSKEELIQKI
VSVEFNRFINYYKKNRDLSTQAAGDRRDGGDHIGNNSGAVRYFVNIGSRDNFDWMSLKDF
LRDTLGLGRDDVFKVDVKEGFSFFNTNAEHTQAVLDTLNSVQLEGRKINVEISKNDGGSN
NRRRDHNGRSGSGGGGRRSQSFGAGKSNRRESSSERPARRGEGRSDSRERRPRRS
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatttgaacaattaggattgaatgaatcgcttctgaaggcgataaacgatcta
ggatttgaaaatccgtcagaagtacaggaaaaagcgattcccctattattggaaaaagat
acagatattgtagcattagcacagactggtacagggaaaaccgctgcttttggttttccg
cttatccagaaaatagacccggagaacagaaacacacaggcacttatattatcaccaacg
cgtgaactttgcctacagattacaaacgagattaaactttacgctaaatacgtaaaaggg
cttcataccgtagcggtatatggtggtgctagcattacagaccaagcaagagaaattaaa
agaggagcacaaattattgttgctactccagggcgtatgcaagacatgattaatagaggt
ttagtaaacatctctaaaattgattattgtatacttgatgaagcagatgaaatgcttaat
atgggcttttatgaagatatcgtttcgatactttctacatcgccagaaaataagagtaca
tggttattctcggctacaatgccacaagaagtatcgcgtattgcaaaagagttcatgaga
aaaccactcgaaataacagtgggacataaaaactcaggttcatctaccgtttctcacgaa
ttttacttagtaaatgcacgtgaccgttttgaagcattaaaacgtcttgcagatgctaac
ccagatattttctcggttgtattctgtcgtacaaaaagagatacacaagctgttgccgaa
aaactaattgatagcggatataacgctgctgcattacatggtgatttatcgcaggcacag
cgtgactcagtaatgaaatcgtttagaaatagacaaatacaaatgcttgttgcaactgat
gttgctgcaaggggtatagatgtagataacattacacacgttattaactaccaacttcct
gatgaaatagaaacttacaaccaccgtagtggacgtacaggtcgtgctggtaaattaggt
acatctattgttattattactaaaagcgaactacgcaagattacttctatcgaaagaata
attaagcaaaagtttgaagaaaagactataccatcaggtatggaaatatgcgaaatacaa
ctatttcatttagccaataggataaaagacgtagaagtagatcatgaaataaactcttac
cttcctgctatttatgaagtaatgaaagatctttctaaagaagaacttattcagaaaata
gtatcggtagagtttaatagatttattaactactacaagaaaaatagagatctttctaca
caagctgctggcgacagacgtgatggtggcgaccatataggcaacaatagcggagcagtt
cgctattttgtaaacattgggtcgagagataatttcgactggatgagtcttaaagatttc
cttcgtgatacacttggcttaggtcgtgatgatgtatttaaagtagatgtaaaagaaggt
ttttctttctttaatacgaatgctgagcatacacaagcagttttagatactttaaacagc
gtgcaacttgaaggacgcaaaataaatgttgaaatatccaaaaatgatggtggatctaac
aaccgacgtagggaccacaacggaagaagtggaagtggcggcggaggtcgtagaagccag
tcttttggagcaggaaaaagtaatagaagagagagctcttctgagcgtcctgcaagaaga
ggtgaaggcagaagtgactctagagaaagaagaccaagaagaagttaa
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