Flavobacterium arcticum: DVK85_11190
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Entry
DVK85_11190 CDS
T05621
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fat
Flavobacterium arcticum
Pathway
fat03420
Nucleotide excision repair
fat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DVK85_11190
03430 Mismatch repair
DVK85_11190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fat03400
]
DVK85_11190
Enzymes [BR:
fat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DVK85_11190
DNA repair and recombination proteins [BR:
fat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DVK85_11190
MMR (mismatch excision repair)
Other MMR factors
DVK85_11190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
nSTAND3
DUF758
Motif
Other DBs
NCBI-ProteinID:
AXG75295
UniProt:
A0A345HFD5
LinkDB
All DBs
Position
complement(2471831..2474161)
Genome browser
AA seq
776 aa
AA seq
DB search
MQKYISQLNEAQQAPTLQKDGPMIVIAGAGSGKTRVLTMRIAYLMSQGVDAFNILSLTFT
NKAAREMKTRIADIVGSSEVKNLWMGTFHSIFAKILRFEGEKLGFPSNFTIYDTQDSVRL
ISSIIKEMQLDRDVYKPKQVLSRISSYKNSLITVKAYYNDPELQEADAMSKKPRLGEIYE
HYVERCFKAGAMDFDDLLLRTNELLNRFPEVLMKYQNRFKYILVDEYQDTNHSQYLIVRA
LSDRFQNICVVGDDAQSIYAFRGANINNILNFQKDYDNVQMYRLEQNYRSTKNIVEAANS
IIDKNQTKLDKVVWTANDEGPKIKVHRSLTDGEEGRFVASTIFEHKMREQLKNGSFAILY
RTNAQSRAMEDALRKRDIPYRIYGGLSFYQRKEIKDVLAYLRLVINPKDEEALMRVINYP
ARGIGGTTLEKLTVAANHYGRTVFDVMENLDRIDLKLNSGTKNKLQDFVTMIKSFQVIDQ
SYDAFYLAEHITKKTGLIQELKKDATPEGIARIENIEELLNGIKDFIEGQKEVDGARGAL
SEFLEDVALATDLDKDTGDDDRVALMTIHLAKGLEFPYVFIVGMEEDLFPSGMSMSTRSE
LEEERRLFYVALTRAEHQAYLTYAQSRYRWGKLVDSEPSRFIEEITDSYLEYLTPIETGY
KYKPRINTDIFGDVDKSKLRQVKPTSGTPPKWITDNDPKPDANIRRLKPVSRPTTQSSNT
PDTKLAIGNVVMHERFGKGQVLNLEGVGGDKKAEIKFEVGGIKKLLLRFAKLDVIG
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atccaaaaatatataagtcagttaaacgaagcacaacaagcacctacactccaaaaagat
ggtcctatgatagtgatagcgggtgcaggatcgggtaaaacccgtgtacttactatgcgt
attgcctacttgatgagtcaaggggtagatgcttttaatatactttcgctaacctttacc
aacaaggcagcgcgcgaaatgaaaacacgtattgccgatattgtaggttcatctgaagtg
aagaacctttggatgggaacatttcactctatatttgcaaaaatattgcgttttgaaggt
gaaaaattgggctttccttccaattttacgatatatgatacgcaagatagtgtaaggctt
ataagttctattataaaagaaatgcagcttgatagggatgtttataagcccaaacaagta
cttagccgtatatcgagttataaaaatagcttaattaccgtaaaagcatattataacgac
cctgaacttcaggaagccgatgcaatgtctaaaaaaccacgactaggcgaaatttatgaa
cactatgtagagcgttgttttaaagcaggtgcaatggattttgatgatttattgctgcgt
accaatgaattattaaatcgttttccagaggtattgatgaagtaccaaaaccgttttaaa
tacatattggtagatgagtatcaggatactaaccattcacagtacttaatagtacgtgct
ttgagcgatcggttccagaatatatgtgtggtaggtgatgatgcacagagtatttatgct
tttaggggtgcaaatattaataacattttgaacttccagaaggattatgataatgtacaa
atgtaccgactggagcaaaactaccgttctacaaaaaacattgtagaggcagctaactct
attatagataaaaaccaaaccaagcttgacaaagtagtttggacagccaatgacgaagga
ccaaaaataaaagtgcaccgcagccttaccgatggcgaagagggacgttttgtggcaagt
accatttttgagcataaaatgcgcgagcagttaaaaaacggaagttttgccatattgtat
cgaaccaatgcgcaatcgcgtgctatggaggatgctttgcgtaaacgtgatattccgtac
aggatatatggaggattgtcattttaccaacgtaaagagattaaagatgtacttgcttat
ttaaggctggtaatcaacccgaaagatgaagaggcgttaatgcgggttattaactacccg
gcaaggggaatagggggaactacgcttgaaaaacttaccgttgcagccaatcattatgga
cgcacggtatttgatgtaatggaaaacctcgacaggatagaccttaaacttaactcgggg
actaaaaataagctgcaagattttgtgactatgataaaaagtttccaagtgattgatcaa
tcgtatgatgctttttatttagccgaacacattaccaaaaaaacgggacttatacaggaa
cttaaaaaagatgctacccccgaaggtattgctcgtattgaaaatatagaggagctacta
aacggtattaaagattttattgaagggcaaaaagaggtagatggcgcacgtggtgcatta
tcagaatttttggaagatgtagctcttgctaccgacctagataaagatactggcgatgat
gacagggtagctttaatgactattcacttagcaaagggactggaattcccatatgtgttt
attgtaggaatggaggaagatttatttccaagtggaatgagtatgagtacccgtagcgaa
ctggaagaagaacgccgtttgttttatgtagcacttacccgtgccgagcatcaggcatac
ttgacctatgcacagtcgcgctaccgttggggtaaactggtagatagtgagccttcgcga
tttattgaggagataaccgatagctatttggaataccttactcctatagaaacaggttat
aagtataaaccgagaattaatacagatatttttggcgatgtagataagtcgaagttacga
caggtaaaaccaacaagtggtacaccacccaaatggattacagataacgaccctaagccc
gatgctaacatacgcagactaaaaccggtatcgcgacctactacacagagtagtaataca
ccagatactaaacttgctataggtaatgtagtaatgcacgagcgttttggtaaagggcaa
gtacttaacctagaaggggtaggaggcgataaaaaagccgagataaaatttgaagtaggc
ggtattaaaaaactattgcttcgctttgcaaaactagatgtaataggataa
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