KEGG   Flavobacterium arcticum: DVK85_13275
Entry
DVK85_13275       CDS       T05621                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
fat  Flavobacterium arcticum
Pathway
fat03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DVK85_13275 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fat03019]
    DVK85_13275 (rny)
Messenger RNA biogenesis [BR:fat03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DVK85_13275 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 KH_PNO1_2nd HDOD KH_KhpA-B DUF4407 YtxH KH-I_KHDC4-BBP HTH_37
Other DBs
NCBI-ProteinID: AXG75314
UniProt: A0A345HFF4
LinkDB
Position
2933441..2935006
AA seq 521 aa
MDSTLMIIIGCIIGLAIGFVIAKFLEKKSASGILGNAKKEVSSILKDAKSEAEAIKKDKI
LQAKEKFLELKAEHEQVILGRDKKISEAEKRIRDKESQVSSELAKAKKVNDEVETKISDY
NNRIDYLDKKQQEIDRLHKSQVEQLEVISGLSAEEAKSQLVDNLKAEAKSNAMSHIQDTI
EEAKLTAQQEAKKIIINTIQRVGTEEAVENCVSVFNIESDDVKGRIIGREGRNIRALEAA
TGVEIIVDDTPEAIILSCFDPVRREIARLALHKLVTDGRIHPARIEEVVAKTAKQIEDEI
IEVGKRTVIDLGIHGLHPELIKIVGRMKYRSSYGQNLLQHSREVAKLCGIMAAELGLNVK
IAKRAGLLHDIGKVPDAESDLPHALLGMQWAEKYGEKEEVCNAIGAHHDEIEMKFLLSPV
IQVCDAISGARPGARRQVLDSYIQRLKDLEEIAYGFGGVKSAYAIQAGRELRVIVESEKV
SDEMAATLSFEISHKIQTEMTYPGQVKITVIRETRAVNIAK
NT seq 1566 nt   +upstreamnt  +downstreamnt
atggattcaacattaatgataattatcggttgcattataggattagcgattggtttcgtg
atagcaaagtttcttgaaaaaaagagtgcgtccggaattttaggtaatgcaaaaaaagag
gtctcctctatactaaaagatgctaaaagcgaagcggaagctattaagaaagataaaata
ctacaagctaaagagaagtttttagagcttaaagcagagcatgaacaagttatattaggg
cgcgacaaaaaaatatcggaagcagaaaaaagaatccgtgataaagagtcacaagtttct
agtgaacttgcaaaagcgaagaaggttaatgatgaagtagaaactaaaatttctgactac
aacaaccgtattgactatcttgataaaaagcaacaagaaatagacagattacacaaaagt
caagtagagcaactagaagttatatcaggactatctgccgaagaagcaaaaagtcaactt
gtagacaatcttaaagcagaagcgaagagcaatgctatgtcgcacatacaagacactata
gaagaggctaaactaacggcacaacaagaagccaaaaaaataataataaacacgatacaa
cgtgtaggtactgaagaagctgttgagaactgtgtatcagtatttaatatagaatcagac
gacgttaaaggacgaattattggacgtgaaggtcgtaacatacgcgcactagaagctgct
acaggtgtagaaattattgtagatgatactccagaggctattatactttcgtgttttgat
cctgtgcgtagagaaatagcacgccttgctttacacaaactggtaacagatggtagaatt
cacccagcacgtattgaagaggtagttgcaaaaacagctaagcaaattgaagacgaaatc
atagaagtaggtaaacgtaccgttatagatttagggatacacggactacaccctgaactt
ataaaaatagtaggaagaatgaaataccgttcttcttacggacaaaacttgctacagcac
tcacgcgaagtagctaagctttgtggtattatggctgctgaattagggcttaatgtaaaa
attgctaaaagagctggattactacacgatattggaaaagtacccgatgcagagagcgac
ttaccacacgcattactaggtatgcagtgggcagaaaaatatggtgaaaaagaagaggta
tgtaatgccattggtgctcaccacgatgaaatagaaatgaaattcttactatctcctgtt
atacaagtgtgtgatgctatatcgggtgctagaccaggtgcaagaagacaagtgctagac
tcatatatacaaagacttaaagatcttgaagaaattgcctatggctttggtggagttaag
agtgcctatgctatacaagctggtagagagctgcgtgtaatagtagaaagcgaaaaggtt
agcgatgaaatggctgctactttatctttcgaaatatcgcataagatacaaacagaaatg
acatatcctggtcaggtaaaaattactgtaatcagggaaacaagagctgtaaacattgct
aaataa

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