Frateuria aurantia: Fraau_0243
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Entry
Fraau_0243 CDS
T01773
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
fau
Frateuria aurantia
Pathway
fau02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fau00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Fraau_0243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fau03021
]
Fraau_0243
Transcription machinery [BR:
fau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Fraau_0243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Cwf_Cwc_15
DNA_pol_phi
Motif
Other DBs
NCBI-ProteinID:
AFC84738
UniProt:
H8L2A4
LinkDB
All DBs
Position
complement(290351..292231)
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AA seq
626 aa
AA seq
DB search
MNSKAHEQQSEIKQLISKGLEQGYLTYAEINDHLPDDVVDPEQIEDIMAVLKGVGIEVHD
AAPDSDPLSDNSNGGGTTDEAAAEEAAALLSAVDAEVGRTTDPVRMYMREMGTVELLTRE
GEIAIAKRIEEGLGQVQTALASFPLTIELLLEEYSQHQEGKRRLSEVLAGFTDLEEAAAA
EAESADDDSSNTSTSNDSDDDSDDDSDDNSNGSDDDDNASSGPDPEEVRRRMDELRGFYE
EFQKVSPEAASIDDPRIVALRGQMAEAFLRLKLPSALIDGFVRRLREVVGDIRSHERVLM
EILVKHVKMPKTEFLKTFPNNEGNLEWAEELGRKRQKWSANIKLHREAIDAEQEKLAGIE
KTLFLPLTDIKEINRTMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEG
NIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISR
QMLQQFGREPTPEELAKEMEMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDANA
SSPVESATETGLMETVRDVLAGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIR
QIEAKALRKLRHPSRSETLRSFLDID
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaaagcccacgagcaacagtcagaaatcaagcagctcatctccaagggtttg
gagcagggctatttgacctacgccgaaatcaacgatcacctgcctgacgatgtcgtcgat
ccggagcagatcgaagacatcatggcagtgctcaaaggtgtgggtatcgaggtgcacgat
gcggcccccgattccgaccctctgtcagacaattccaacggcggcggcaccaccgacgag
gcggcggccgaagaagcggctgccttgctgtcggcggtcgacgccgaagtcggtcgcacc
accgacccggtccgcatgtacatgcgtgaaatgggtacggtcgagctgctgacccgcgag
ggcgaaatcgccatcgccaaacgcatcgaggaaggtctgggccaggtccagaccgcgttg
gccagctttccgctgaccatcgaactgctgctggaggaatacagccagcatcaggaaggc
aagcgccgtctcagcgaagtgctggccggtttcaccgatctggaagaagccgccgcggcc
gaggccgaatccgctgacgatgacagcagcaatacctcgaccagcaatgattcggatgac
gactccgacgacgactccgacgacaacagcaacggttcggacgatgatgacaacgccagc
agcggcccggatccggaagaagtccggcgccggatggacgagctgcgcggcttctacgaa
gaattccagaaggtctcgccggaagcggccagcatcgacgatccccgcatcgtcgccctg
cgcggccagatggccgaagccttcctgcgactgaagctgccctcggccctgatcgacggc
ttcgtgcgccgcctgcgcgaagtggtgggcgatatccgcagccacgagcgcgtgctgatg
gaaattctggtcaagcatgtgaagatgccgaagaccgagttcctgaagaccttccccaac
aacgagggcaacctcgagtgggccgaggaactgggccgcaagcgtcagaagtggtcggcc
aacatcaagctgcaccgcgaagcgatcgatgccgaacaggaaaagctggcaggtatcgaa
aagaccctgttcctgccgctgaccgacatcaaggaaatcaaccggaccatgtcgatcggc
gaggccaaggcccgtcgcgccaagaaggaaatggtcgaggccaacctgcgtctggtgatc
tcgatcgccaagaagtacaccaaccgcggcctgcagttcctggatctgatccaggaaggc
aacatcggcctgatgaaggctgtcgacaagttcgaataccgtcgcggctacaagttctcg
acctatgccacctggtggattcgccaggcgatcacccgctcgatcgccgaccaggcccgc
accatccgaattccggtgcacatgatcgagaccatcaacaagctcaatcgcatttcccgc
cagatgctgcagcagttcggccgcgagccgacgcctgaagaactggccaaggaaatggag
atgcccgaggacaagatccgcaaggtgctgaagatcgccaaggaacccatctcgatggaa
actccgatcggtgacgacgaagattcgcatctgggtgacttcatcgaagatgccaatgcc
tcttcgccggtcgaatcggccaccgaaacgggcctgatggagaccgtccgcgacgtgctg
gccggcctgacgccacgtgaggccaaggtgttgcgcatgcgcttcggcatcgacatgaat
accgaccataccctggaagaggtcggcaagcagttcgacgtgacccgcgagcggatccgc
cagatcgaagccaaggccctgcgcaagctgcgtcaccccagccgctcggaaaccttgcgc
tccttcctcgatatcgactga
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