Frateuria aurantia: Fraau_0420
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Entry
Fraau_0420 CDS
T01773
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
fau
Frateuria aurantia
Pathway
fau03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Fraau_0420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fau03021
]
Fraau_0420
03400 DNA repair and recombination proteins [BR:
fau03400
]
Fraau_0420
Enzymes [BR:
fau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Fraau_0420
Transcription machinery [BR:
fau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Fraau_0420
DNA repair and recombination proteins [BR:
fau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Fraau_0420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
ZMYND11_CC
Motif
Other DBs
NCBI-ProteinID:
AFC84908
UniProt:
H8L3V3
LinkDB
All DBs
Position
476159..476449
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AA seq
96 aa
AA seq
DB search
MARITVEDCLKVVDNRFELVLMATKRARQLANGVEPVVSPENDKPSVLALREIAARRIDE
ATIDEIDRAERERAEREALEWAAAEVDEDLSKGGDE
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtattaccgtagaagactgcctgaaggtggtcgacaatcgcttcgagctggtg
ttgatggcgaccaagcgagcccgtcagctggccaatggcgttgagccggtagtcagcccg
gaaaatgacaagccctcggtgctggccctgcgcgagatcgcggcccgtcgcatcgatgaa
gccaccattgacgagatcgatcgtgccgaacgcgagcgcgccgagcgcgaggcgctggaa
tgggcggccgctgaagtcgacgaggacctctccaagggcggagacgaataa
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