Frateuria aurantia: Fraau_0770
Help
Entry
Fraau_0770 CDS
T01773
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
fau
Frateuria aurantia
Pathway
fau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Fraau_0770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fau03021
]
Fraau_0770
03019 Messenger RNA biogenesis [BR:
fau03019
]
Fraau_0770
Transcription machinery [BR:
fau03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Fraau_0770
Messenger RNA biogenesis [BR:
fau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Fraau_0770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
AAA_22
AAA_25
DnaB_C
Motif
Other DBs
NCBI-ProteinID:
AFC85241
UniProt:
H8KZW0
LinkDB
All DBs
Position
complement(845000..846751)
Genome browser
AA seq
583 aa
AA seq
DB search
MSDIETPESSGAPRAESKPAAEPRPRAPRRTTRSKTAAAAPAQSSLPIDAAPASKPAPAA
EAPTPAAPAPVPPPAPAPSESQVNEASSAPRVAPEQREPAGNGQPHGHQRNASTNGGNAN
DRGRRRRHERNQPRGQGGNGGRHANPHGLPVDDENADAGSSDRLINLTELKRKKNYELLE
YAESLGIQEGVSRARKQDVVFSILKAHARSGGGIWAEGVLEILQDGFGFLRSADESYLAG
PDDIYVSPSQIRRFNLRTGDYITGRVRHPKEGERYFALLKVDDINGDPPEASKNKVLFEN
LTPLFPRQAFKLERGNGSSEDITGRILDLVAPIGRGQRALIVAQPKAGKTMMLQNIAQAI
MYNHPDAHLIMLMIDERPEEVTEIARSVRAEVISSTFDEPAVRHVQVAEMVIERAKRLVE
HKKDVIILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTI
VATALTETGSKMDEVIYEEFKGTGNMEVHLNRRIAEKRVYPAIDINRSGTRREDLLIEPD
MLQKIWILRKLLHPMDELAAMEFMLDKMKNTKSNDEFFNSMKR
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgatatcgaaactccagaatcctccggcgccccccgcgccgaatccaagcctgcg
gctgagccccggccccgcgcaccgcgtcgcacgaccagaagcaagacggcggctgccgca
ccggcgcagtcttcgctaccgatcgatgccgcgccggccagcaaacctgctccggccgcc
gaagcgccgactccggcggcccccgccccggtgccgccgcctgcgcctgcgccgagcgaa
agccaggtgaacgaagcgagctctgccccccgggtagcccccgagcagcgcgaacccgcc
ggcaatggccagccccatggccatcagcgcaatgcctcgaccaacggcggcaatgccaat
gaccgtggacgccgccggcgccacgaacgcaaccagcctcgcggccagggcggcaacggc
ggccgccatgccaatccacacggattgccggtggacgacgaaaatgccgatgccggcagc
agtgatcgcctgatcaatctgaccgagctgaagcgcaagaaaaactacgagctgctggaa
tacgccgagtccctgggcattcaggaaggtgtttcccgcgcccgcaagcaggatgtagtg
ttctcgatcctgaaggcccacgcccgttcgggcggcggcatctgggccgaaggcgtgctg
gaaatcctgcaggacggtttcggcttccttcgctccgccgatgagtcctatctggccggt
ccggacgacatctacgtctcccccagccagatccggcgcttcaatctgcgtaccggcgac
tacatcaccggccgcgtccgtcaccccaaggaaggcgagcgctacttcgccctgctgaag
gtcgacgacatcaatggcgacccgccggaagcgagcaagaacaaggtcctgttcgagaat
ctgacgccgctgtttccccgccaggccttcaagcttgaacgcggcaacgggtccagcgaa
gacatcaccggtcgcatcctggacctggtcgcgccgatcggccgcggccagcgggccctg
atcgtcgcgcagcccaaggccggcaagaccatgatgctgcagaacatcgcccaggccatc
atgtacaaccatcccgatgcccatctgatcatgttgatgatcgacgagcgtccggaggaa
gtcaccgaaatcgcccgcagcgtacgtgccgaagtcatttcctcgacttttgacgagcct
gccgtgcgccacgtccaggtcgccgagatggtgatcgagcgcgccaagcgcctggtcgag
cacaagaaggatgtcatcatcctgctggactcgatcacccgcctggcccgtgcctacaac
accgtggtgcccagctccggcaaggtgctgaccggcggcgtggatgccaacgccctgcag
cgccccaagcgtttcttcggtgcggcccgcaatatcgaggaaggcggcagcctgaccatc
gtcgccaccgccctgaccgaaaccggctccaagatggacgaggtgatctacgaggaattc
aagggcaccggcaacatggaagtgcacctgaaccgccgcattgccgaaaaacgggtctat
cccgccatcgacatcaatcgctccggtactcgccgcgaggatctgctgatcgagccggac
atgctgcagaaaatctggatcctgcgcaaactgcttcatccgatggatgaactggccgcg
atggagtttatgctggacaagatgaagaacacgaagtccaacgacgaattcttcaactcg
atgaagcgctga
DBGET
integrated database retrieval system
