Frateuria aurantia: Fraau_1096
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Entry
Fraau_1096 CDS
T01773
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fau
Frateuria aurantia
Pathway
fau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Fraau_1096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fau03019
]
Fraau_1096
03016 Transfer RNA biogenesis [BR:
fau03016
]
Fraau_1096
Enzymes [BR:
fau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Fraau_1096
Messenger RNA biogenesis [BR:
fau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Fraau_1096
Transfer RNA biogenesis [BR:
fau03016
]
Prokaryotic type
tRNA degradation factors
Fraau_1096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
NIR_SIR_ferr
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
AFC85556
UniProt:
H8L3C0
LinkDB
All DBs
Position
1176331..1178436
Genome browser
AA seq
701 aa
AA seq
DB search
MAKVTKSFQYGKHEVKLETGEIARQASGAVMASMGGTVVLVSVVAAAKPREGQDFFPLTV
DYVEKFYSAGRIPGGFFKREGRPTEKETLTSRLIDRPVRPLFPEEYKNEVQVIAQVISLN
PEIDGDIVAMLGASAALSLAGIPFKGPIGAARVGYANGQYLLNPTVSELKTSALDLVVAG
TSNAVLMVESEAQLLTEEVMLGAVVFGHQQMQTAINAIAELATEAARPSSTWTAPARNEA
LVAAIAGAVGDKLAQAFQVRDKLQRRDAISAIKADVLAELAPQAEANAWPAAELAKEFAE
LEYRTMRDSVLQTKVRIDGRQLADVRPISVRVGVLPRTHGSALFTRGETQALVVATLGTT
RDAQIIDAPEGESKDSFLFHYNFPPFSVGETGRFGAPKRREIGHGRLAKRGVQAVKPSIE
EFPYVIRMVSEITESNGSSSMASVCGSSLAMMDAGVPLKAPVAGIAMGLVKEGDNYVVLS
DILGDEDHLGDMDFKVAGTAEGISALQMDIKIDGITEEIMKVALEQAKGGRLHILGEMAK
GLNAPREEMSEFAPRLLTIKIHPDKIREVIGKGGATIRAITEETGTTIDITDDGNVVIAS
VNREAADAAKLRIEQIVSDVEPGRIYEGKVAKLMDFGAFVTILPGKDGLVHVSQISNERV
EKVSDKLKEGDIVKVKVLEVDKQGRIRLSIKAVAEDEAASA
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaagtaaccaagtcattccagtacggtaaacacgaggtcaagctggagacgggc
gaaatcgcccgccaggcctcgggtgccgtcatggcaagcatgggcggcaccgtcgtgctg
gtctccgtcgtggcggctgccaagccccgcgaaggccaggacttcttccccctgaccgtc
gactatgtcgagaagttctactcggccggccggatccccggcggtttcttcaagcgcgaa
ggtcgtccgaccgagaaagagacgctgacctcgcgtctgatcgatcgtccggtgcgtccg
ctgttcccggaagagtacaagaacgaagtgcaggtcatcgctcaggtgatctcgctgaac
ccggaaatcgatggcgacatcgtcgccatgctgggtgcctcggccgcgttgagcctggcc
ggcatcccgttcaagggcccgatcggcgccgcccgcgtcggttatgccaatggccaatac
ctgctgaaccccaccgtttcggagctgaagacctcggccctggatctggtcgtggccggt
accagcaacgccgtgctgatggttgaatccgaagcccagctgctgaccgaggaagtcatg
ctcggcgccgtggtgttcggtcaccagcagatgcagaccgcgatcaacgcgatcgccgaa
ctggccaccgaagcggctcgcccgtcttcgacctggaccgctccggcccgcaacgaagcg
ctggtggcagccattgccggtgccgtcggcgacaagctggcgcaggccttccaggtccgc
gacaagctgcagcgtcgcgacgcgatctccgccatcaaggccgacgtgttggccgagctg
gctccgcaggcagaagccaacgcctggcccgccgccgagctggccaaggagttcgccgag
ctggaataccgcaccatgcgtgacagcgtcctgcagaccaaggtccgcatcgacggccgt
cagctggctgacgtgcgtccgatctcggtccgcgtcggcgtgctgccgcgcacccatggt
tcggccctgttcacccgtggcgagacccaggctctggtggtagctaccttgggtaccacc
cgcgacgcgcagatcatcgatgcgcccgaaggtgagtccaaggacagcttcctgttccat
tacaacttccctccgttctcggtgggcgaaaccggccgtttcggcgctcccaagcgtcgc
gaaatcggtcatggtcgtctggccaagcgcggcgtgcaggccgtcaagcccagcatcgag
gaattcccgtacgtgatccgcatggtttcggaaatcaccgaatccaacggctcctcgtcg
atggcctcggtctgcggttcctcgctggccatgatggacgccggcgtgcccctgaaggcc
cccgtggccggtatcgccatgggtctggtcaaggaaggcgacaactatgtcgtgctgtcc
gacatcctgggtgacgaagatcacctgggcgacatggacttcaaggtggccggtaccgcg
gaaggtatctcggcgctgcagatggacatcaagatcgacggtatcaccgaagagatcatg
aaggtcgctctggagcaggccaagggtggtcgtctgcatatcctgggcgaaatggccaag
ggtctgaacgctccccgcgaggaaatgagcgaattcgccccgcgtctgctgaccatcaag
atccatccggacaagatccgcgaagtgatcggcaagggtggcgccaccatccgcgccatc
accgaagagaccggtaccaccatcgacatcaccgatgacggcaatgtcgtgatcgcctcg
gtcaaccgcgaagcggccgatgccgccaaactgcgcatcgagcagatcgtttccgacgtc
gagccgggccggatctacgaaggcaaggtcgccaagctgatggactttggtgccttcgtc
accatcctgccgggcaaggacggactggtccacgtttcgcagatctccaacgagcgcgtc
gaaaaggtttccgacaagctcaaggaaggcgatatcgtcaaggtcaaggtgctggaagtc
gacaagcagggccgtatccgcctgtcgatcaaggccgttgccgaagacgaggccgcgtcc
gcctga
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