Frateuria aurantia: Fraau_1276
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Entry
Fraau_1276 CDS
T01773
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
fau
Frateuria aurantia
Pathway
fau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Fraau_1276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fau03400
]
Fraau_1276
Enzymes [BR:
fau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Fraau_1276
DNA repair and recombination proteins [BR:
fau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Fraau_1276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AFC85718
UniProt:
H8L504
LinkDB
All DBs
Position
complement(1377680..1381111)
Genome browser
AA seq
1143 aa
AA seq
DB search
MTTAAALTPGLMVIHGNQIEDLRELCVAWMRRHPLRPLENERFLVYSNGIAQWLKQALAE
DAGCGIAAALQFDLPSRFMWSAYRLVLGEAAIPTQSPLDKAPLTWRLLRLLPECLHQEVF
APLRHFLADDPDLRKRHQLAERLADLFDQYQVYRADWLNDWAAGRDELRSLRHGAIPLQP
QQLWQPALWRALLADINDPELVQGRAFVHPRFVAALETMEQPPVGLPRRIIVFGITSLPA
QALEALAAMARFSQVILCVHNPCQHHWGDIVEDKDLLRHQYRRHPHRPGQIIGAELLHAQ
AQPLLAAWGKQGRDYINLLDRHDDPERYREHFERIDVFEPPASDHLLGQLQDDIFDLRPL
RESRELWPAVDPARDHSIRFHVAHSAQREVEILHDQLLAAFSADPALRPRDIIVMVPDIQ
TYAPAIQAVFGQYPRGDARHIPFTIADQGVRGQSPLTIALEQLLQLPRGRLAVSDVLDLL
DAAPLRQRFGIAEQDLPQLRQWLDGAGIRWGLDAGQRAALGQRAGLEQNTWDFGLRRLLL
GYASAEEAFAGIEPYADIGGLDAALLGPLIDLLQALRQPLQQLAEAHAPAAWGMIFRQLL
EQFLRPVDEQDQALVDQLLKALDDWLDLCRDAGLEDALPLSVAREGWLATLDQGGLSQRF
LSGAVNFCTLLPMRTIPFRQVCLLGMNDGDYPRSKTPMDFDLMAGDYRPGDRSRRDDDRY
LLLEALLSARDRLHVSWVGRSIRDDSERPASVLVGQLRDHLVSGWRLAGGGDLLQALTTI
HPLQAFSRRYFEADTAWYTHAGEWAAVHQTPTEDARSAPSLPAWQDPPPLSLDRLQAFLA
DPVRAFFQQRLGIHLDQYGEELQDDEHFGLDGLQRYSLTQALLDETRQQLDLQGAELAPA
LALAAQRLQGRGQLPLAGFGAALRDELLDPLPDQFQRYRQQRERWSRPLAATLPLQFVHG
TLRLDDWLGGLCRDADDQPASLQLLPRRLLNKKALNWHRLLKAFVTHAAACASGIGLHTV
LIAEDVSVSWAPLPQPTAETILADWLDGWAQGMCQPLPTARKTALSWLAHAEEDLSRAWK
EAARTYQDDFTHGGEVRHSASLARQYPDFAQLVAEPEAFARWAKQLYRPLLQHPPTLLDA
DSP
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgccgcggcactgacccccggcctgatggtgatccacggcaaccagattgaa
gatctgcgtgagctgtgcgtggcctggatgcgccgccatcccttgcgccctctggaaaac
gaacgttttctggtctacagcaacggcatcgcgcagtggctgaagcaggctctggccgaa
gatgccggctgcggcatcgccgccgccctgcagttcgacctgccctcgcgctttatgtgg
agcgcctatcggctggtactgggcgaggccgcgattcccacccagtcgccgctggacaag
gcgccgctgacctggcgattgctgcgcctgctgccggaatgcctgcaccaggaggtgttc
gccccgctgcgccactttctggccgatgatccggacctgcgcaaacgccaccagctggcc
gagcgtctggccgatctgttcgaccaataccaggtctatcgcgcggactggctgaacgac
tgggcggcaggtcgcgacgaactgcgcagcctgcgtcacggtgccatccccctgcagcct
cagcagctgtggcaacccgcgttgtggcgggccttgctggccgatatcaatgatcccgag
ctggtccagggccgggctttcgtccatccgcgttttgtcgccgcgctggaaaccatggag
cagccgccggtcggcctgccacgtcgcatcatcgtgttcggcatcacctcgctgccagcc
caggcgctggaggcactggcggccatggcccgcttcagccaggtgatcctgtgcgtgcac
aatccctgccagcatcactggggcgatatcgtcgaggacaaggatctgctgcgccaccag
tatcgtcgccatccgcaccgtcccggccagatcatcggcgccgagctgctgcatgcccag
gcccagccgctgctggcggcctggggcaaacaggggcgtgactacatcaatctgctggac
cggcatgatgatcccgagcgctaccgtgaacatttcgagcggatcgatgtgttcgagccc
ccggccagtgatcatctgctgggtcagctgcaggacgacatcttcgacctgcgcccgctg
cgggaaagccgcgagctatggccggcggtcgacccggcccgtgatcactcgatccgcttt
cacgtcgcccacagcgcccagcgcgaggtggagatcctgcacgaccagctgctggccgcc
ttcagtgccgatcccgcgctgcgtccgcgcgacatcatcgtcatggtgccggacatccag
acctatgccccggcgatccaggccgtgttcggtcagtatccgcgcggcgatgcacgccat
atcccgttcaccatcgctgaccagggcgtgcgcggccagagtccgctgaccattgccctg
gaacagctgctgcagctgccgcgcggacgactggcggtcagcgacgtgctggacctgctc
gatgccgcgccactgcgccagcgcttcggcatcgccgagcaggatctgccccagctgcgg
caatggctggacggtgccggcatccgctggggcctggatgccggtcagcgcgcggcgctg
ggtcagcgcgcgggactggaacagaatacctgggacttcgggctgcgccgactgctgctg
ggttatgccagcgccgaggaggcctttgccggcatcgagccctatgccgatatcggcggt
ctggacgccgccctgctcggaccgctgatcgacttgctgcaggccctgcggcaaccgctg
cagcaactggccgaagcccatgcccccgccgcctggggcatgattttccgccagttgctg
gaacagttcctgcgtccggtcgacgagcaggaccaggcgctggtcgaccagctgctgaag
gcgctcgatgactggctggacctgtgccgggacgcgggactggaggatgccctgccactg
tcagtggcccgcgaaggctggctggcgaccctggaccaaggcggactgagccagcgtttc
ctcagtggcgcagtgaatttctgcaccttgctgccgatgcgtaccatccccttccgccag
gtctgtctgctgggcatgaacgatggtgattatccgcgcagcaagaccccgatggacttc
gatctgatggccggcgactaccgtcccggcgaccgttcgcgccgcgacgatgatcgctat
ctgttgctggaagccctgctgtcggcccgggaccgacttcatgtcagctgggtcggtcgc
agcatccgcgatgacagcgagcgacctgcctcggtcctggtcggccagttgcgtgatcat
ctggtttcaggctggcggctggccggcggcggagacctgctgcaggcactgaccacgatc
catccgctgcaagccttcagccggcggtatttcgaagctgataccgcctggtatacccat
gctggcgaatgggccgccgtgcatcagaccccgacggaagatgcccgctctgcaccaagc
ctgccagcctggcaagatccgccgccgctgtcgctggatcgactgcaagcctttctggcc
gacccggtacgcgcctttttccagcaacggctgggcattcatctggatcagtacggtgag
gagctgcaggacgacgaacacttcggtctcgacggcctgcagcgctacagcctgacccag
gccctcctggatgaaacccgccagcagctggatctgcaaggcgccgaactggcgccggcc
ttggcactggccgcgcaacgcctgcaaggtcgtggccagctgcccctggccggtttcgga
gccgccttgcgcgatgagctgctggatccgctgcccgaccagttccaacgctaccggcag
caacgggagcgctggtcacgaccgctcgccgccaccttgccactgcaattcgtccacggc
accctgcggctggacgactggctgggcggcctgtgccgcgatgccgacgatcagccggcc
agcctgcaactgctgccgcgacgtctgctgaacaagaaagcgctgaactggcatcgcctg
ctgaaggcttttgtcacacatgcggcggcctgcgccagcggcatcggcctgcacaccgtg
ctgatcgccgaggatgtcagcgtgagctgggcgcccttgccgcaaccaacggccgagacc
attcttgccgactggctggacggctgggcacaaggcatgtgccagcctctgccgaccgcg
cgcaagacggccctgagctggctggcccatgccgaagaggacctgtcgagggcctggaag
gaggccgccagaacctatcaggacgacttcacccacggtggcgaagtccgacacagcgcc
agtctggcacggcaatatcccgacttcgcccagctggtcgccgagcccgaggccttcgcc
cgctgggccaagcaactttatcggcccttgctgcagcacccgcccacccttctggacgcc
gacagcccatga
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