Frateuria aurantia: Fraau_1874
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Entry
Fraau_1874 CDS
T01773
Name
(GenBank) tRNA pseudouridine synthase, TruD family
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
fau
Frateuria aurantia
Brite
KEGG Orthology (KO) [BR:
fau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fau03016
]
Fraau_1874
Enzymes [BR:
fau01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Fraau_1874
Transfer RNA biogenesis [BR:
fau03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Fraau_1874
Prokaryotic type
Fraau_1874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AFC86267
UniProt:
H8L055
LinkDB
All DBs
Position
complement(1989117..1990142)
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AA seq
341 aa
AA seq
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MNDTPTVTELPWAYGSPPLRGLLKSRPEDFRVDEILGYEADGEGEHVLLHVEKKGLTTDG
LARELGRFAGVPSVGIGYAGLKDRHAVTTQRISLQLAGKPDPDWSAFPNPDVKILEAVRH
RRKMKRGALRGNRFVLVLREVQGDPQAAEAVLAKIASQGVPNYFGEQRFGREGGNVAKAR
AMFAGRRVDRDTRGFLLSAARSQIFNAVLARRVEQGNWATGMDGEIWSLAGSRSWFGPEN
PDATLVERLGRGDIHPSGPLWGQGDCPSAELAGALERDVAAEYEDLAQGLVDARMDQDRR
ALRLIPGDLQWRWLDPATLELQFELPAGAYATTVVRELIGH
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatacccctaccgtcaccgagctgccctgggcctatggctcgccgccgctgcga
gggctgttgaagagtcgaccggaagatttccgggtcgacgaaattctcggctatgaagcc
gacggcgaaggcgagcatgtgctgctgcacgtggaaaaaaagggactgaccacggacggt
ctggcccgtgagctggggcgttttgccggggtgccgtcggtgggtatcggttatgcgggg
ctcaaggatcgccatgccgtgactacccagcggatatcgctgcaactggccggcaagccc
gatccggactggtcagcgtttccaaacccggatgtgaagattctcgaggcggtgcgccat
cgtcgcaagatgaagcgcggcgcactgcgtggcaaccgctttgtgctggtattgcgggaa
gtgcagggcgatccgcaggcggcggaagccgtgctggcgaagatagccagccagggtgta
ccgaattatttcggcgagcagcgcttcggtcgcgaaggcggcaacgtggccaaggctcgc
gcgatgtttgccggccggcgcgtcgaccgtgatacccgcgggtttctgttgtcggccgct
cgctcgcagatcttcaatgccgtgctggctcgccgggtcgagcagggcaactgggcgacc
ggcatggatggcgagatctggtcattggccggatcgcgctcgtggttcggaccggagaac
ccggatgcgaccctggtcgaacggctggggcgcggcgacatccacccctccggtccgctc
tgggggcagggtgactgtccttcggcggagctggccggcgcgctggagcgcgacgtggcg
gcggaatacgaagatctggctcagggcctggtcgatgcccgcatggatcaggaccgtcgg
gccttgcgactgattcccggtgatctgcagtggcgctggctggatccggccacgctggag
ctgcagttcgaactgccggcgggcgcctatgcaaccaccgtggtccgcgagctgatcggt
cattga
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