Flavobacterium acetivorans: LNP19_01495
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Entry
LNP19_01495 CDS
T10181
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K07713
two-component system, NtrC family, response regulator HydG
Organism
fav Flavobacterium acetivorans
Pathway
fav02020
Two-component system
Brite
Two-component system [BR:
fav02022
]
NtrC family
HydH-HydG (metal tolerance)
LNP19_01495
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
AAA_22
HTH_50
AAA_2
HTH_29
HTH_17
nSTAND3
HTH_28
HTH_30
HTH_23
AAA_16
AAA_7
MCM
ATP-synt_ab
BRCT_3
HTH_7
HTH_22
Motif
Other DBs
NCBI-ProteinID:
UFH35731
LinkDB
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Position
341228..342568
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AA seq
446 aa
AA seq
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MKKILLIEDDVSFCKLLEKFLLKKGYEITTAFSANEARSKINSIRYDLVLTDLRLPDTDG
IALMAEIKTVFPDTPVILMTGYSDVSTAVKAIKKGATDYISKPFNPEEVLLVIANALQES
KEEIISQTTSKPQKPTHTQNSKELIKGISKASLKLAEYIELVGPTNMSVLIIGESGTGKE
VIAKNIHQASSRKNDPFIAVDCGAIPKELAASEFFGHLKGSFTGAINDKIGFFEAANKGT
LFLDEIGNLSYENQIQLLRALQERKIKPVGSNKEIAVDIRIIAATNEDLREAVKKGDFRE
DLYHRINEFSIHSPSLVERDIDLMVFADFFLEKANEELNKAVIGFSPEVNTIFQKYSWPG
NLRELKNCIKRATLLTKGNCIEKTSLPLEFFLEQHTETPDLSLSKNEKDTILDALEQTGS
NKSEAAKLLKITRKTLYNKIKRYGID
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagattttactaattgaggatgatgtttctttttgcaaattattggaaaaattt
ctgctaaaaaaaggctacgaaataacaactgctttttcagccaatgaagcgagaagcaaa
ataaattcaattcgatacgatcttgttcttaccgatttaagactgcctgacaccgatggc
atcgcgctaatggcagaaataaaaacagttttccctgatactcctgtgattttaatgacc
ggatattctgatgtaagcactgccgtaaaggccatcaaaaaaggagctacagattacatt
tcaaaaccttttaaccccgaagaagtactgctggtaattgccaacgccttgcaggaatcc
aaagaagaaatcatctcacaaacaacctcaaagccccaaaaaccaacccatactcaaaac
tcaaaagaattgattaaaggcatttccaaagcctcattaaaactagccgaatacatcgaa
ttagttggcccaaccaatatgtcggttttgattattggggaaagcggtacaggaaaagag
gtaattgccaaaaatattcatcaggcaagctcccgaaaaaatgacccttttatcgccgtt
gattgtggagcaatcccaaaagagctggctgcaagtgaatttttcggtcacctaaaagga
tcctttacaggagccatcaatgacaaaattggtttttttgaagccgcaaataaaggcacc
ctttttttagacgaaattggaaacctatcctatgaaaaccaaattcaattgttacgcgcc
ttacaagaaagaaaaataaaacccgtaggctccaataaggaaattgcagtcgatattcga
attattgcagcaaccaacgaggacttacgtgaagcagtaaaaaaaggagactttagagaa
gatttgtaccatcgcattaatgaattttcgattcattcgccttccttggtagaaagagac
atcgatttgatggtgtttgccgacttttttctcgaaaaagccaatgaagaactcaataaa
gcagtgattggattttctcctgaagtaaacactatttttcaaaaatacagctggccagga
aacctgagggaattgaaaaactgcatcaagcgagcaactcttttgaccaaagggaattgc
atcgaaaaaacgagtttaccccttgagttttttttagaacaacataccgaaactcctgat
ttgtctttatccaaaaatgaaaaagatacaattctagacgccctagaacaaacaggaagc
aataaatctgaagcggctaaacttctcaaaatcactcgtaaaaccctgtacaacaaaata
aaacgctacggtatcgattag
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