Flavobacterium acetivorans: LNP19_03055
Help
Entry
LNP19_03055 CDS
T10181
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
fav Flavobacterium acetivorans
Pathway
fav02020
Two-component system
fav02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fav00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LNP19_03055 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LNP19_03055 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fav03021
]
LNP19_03055 (rpoN)
Transcription machinery [BR:
fav03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LNP19_03055 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
Crp
HTH_12
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
UFH36027
LinkDB
All DBs
Position
689713..691179
Genome browser
AA seq
488 aa
AA seq
DB search
MLKQFLNLKLSQKLSPQQIQLMKLIQLPTQAFEQRLVEEMNENPALEAGKEEDDYEKEEF
ENEDYDDYDDAESDRIEADDINIDEYLSSDDTPDYKTQANNYSDDDEDRESPLAAPISFH
QDLINQLNTFILTDEERDIAEFLVGSIDDMGYIRRSIPDIVDDMAFTQAIYTDEATVQRM
LHVIHELEPSGVGAQDLQECLLLQLKHKTPTESVALATDIIENQFDAFTKKHYDKLIQKY
NISNEQLKKAIHEIEKLNPKPGGAFSGNNKVTENVVPDFAIRIVDGELELTLNGRNAPSL
HVSKDYQEMMQTYKDSKDKSSAQKDAVQFIKQKLDSAKWFIDAIRQRQETLFVTMNAIMH
YQQEYFLDGDETKLKPMILKDIADLVGLDISTVSRVANSKYVETPYGTKLIKEFFSEAMK
NDQGEDVSTLEIKKILQNIIEDEDKKKPLPDDQLAELLKEKGYPIARRTIAKYREQLDIP
VARMRKKI
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagcaattcttaaatttaaaattatcccagaaattatctccacagcaaattcag
ctgatgaagttaattcaattgcctacgcaagcctttgaacaacgtttagttgaagagatg
aatgaaaatccggctctagaagcaggaaaagaagaagatgattacgaaaaagaggagttt
gagaacgaagattatgatgactatgatgatgctgaatcggatagaattgaagccgatgac
atcaatattgacgagtatctaagcagtgatgacacccctgattacaaaacgcaagccaac
aactacagtgatgatgatgaagatcgtgaatctccactggcggcgcctatcagttttcat
caggatttaatcaatcaattgaacacttttatcctaacggacgaggagcgcgacattgcc
gaatttctagtaggaagcattgacgacatgggttatatccgcagaagcattcccgatatt
gttgacgacatggcttttacccaagcaatctatactgatgaagctacggtacaaagaatg
ctccatgtcatccacgaactggaaccgtctggtgtaggtgcgcaggatttacaggaatgt
ttgttattgcaattgaagcacaaaacacctacagaatctgtagcattggcaaccgatatt
atcgaaaatcaatttgatgcttttaccaaaaaacattacgacaaactcattcaaaaatat
aacatttcgaatgaacagcttaaaaaagcgattcatgaaattgaaaaactaaatccaaaa
ccaggtggcgcttttagcggaaacaataaagttaccgaaaatgtagttcctgattttgcc
attcgaattgtagatggcgaactggaattgactttgaacggaaggaatgcgccttcgctg
catgtctcaaaagactatcaggaaatgatgcaaacctataaggattctaaagacaaatct
tcagcacaaaaagatgctgtacagtttataaagcaaaaactggattcggccaaatggttt
atcgacgccatacgtcaacgccaagaaaccctttttgtaaccatgaatgccatcatgcat
tatcagcaagaatacttcttggatggtgacgaaaccaagctaaaaccgatgatcctgaaa
gacatcgccgatttggtgggattggatatttctaccgtatcccgtgtagccaacagtaaa
tatgtcgagacgccttatggaacgaaattgatcaaagaattcttttcggaagcaatgaaa
aatgaccaaggtgaagatgtctctactttggaaatcaagaaaattcttcaaaacatcatt
gaagacgaagacaagaaaaaaccacttcctgatgatcagttggccgaattgctaaaagaa
aaaggctatccgattgccagaagaaccattgccaaatacagagaacaactggatattcct
gtggcgagaatgcgaaaaaaaatataa
DBGET
integrated database retrieval system
