Flavobacterium acetivorans: LNP19_05320
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Entry
LNP19_05320 CDS
T10181
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
fav Flavobacterium acetivorans
Brite
KEGG Orthology (KO) [BR:
fav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fav01002
]
LNP19_05320
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fav01011
]
LNP19_05320
Peptidases and inhibitors [BR:
fav01002
]
Cysteine peptidases
Family C82
LNP19_05320
Peptidoglycan biosynthesis and degradation proteins [BR:
fav01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
LNP19_05320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
TBPIP_N
Motif
Other DBs
NCBI-ProteinID:
UFH36462
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All DBs
Position
complement(1193314..1194960)
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AA seq
548 aa
AA seq
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MKKFILPIVALLFGFSVVAVYQYKNNDLLVKVIYFVKNLPESISGKPINSIDNASLNNFF
KKYPHLDKFQLEVTALYKKRNYKSIWYNDGELIKFANELYSKSEQIENEGLKFDLAYKDK
MDAIFNDASAAKISQTEKELLLSSLYIYYAKKVFYGIDTDEIHQTGWFLPRKELSYKNLL
DSLLAEPELLDKNEKILIGQYYKLRAALQKYRQIEKNNDWEFIETESQMKKYGPGDNAKT
ISQIRHRLFVLGDLPQDSKNNLYDEELKAGILNFKTRNGYKPDYLIGSQHINRMNQSIEK
YIQLISINMERCRWISPKLEKANEFIVINIPSFQLFYIKNGENVLSSRVFVGINTMETVI
FSSTISSIVFSPYWNVPQSILENEIKPAMEKDPDYLTKHDLEWNKKSLRQRPGPKNALGV
VKFVFPNTYSIYLHDTPYKLNFNFEFPRFSHGCINMQKAKELAYKILENNPQWPIEKINE
AMNSGVETVYLLKKPIPIHIGYFTSWANDEGKINFYFDIYTKDDLLSEFLFNDTLNLAET
TPVKRLSN
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtttattttacccatagtagctcttttatttggtttttcagttgtcgctgtg
taccaatacaaaaataatgaccttctggttaaggtgatttactttgtcaaaaatctcccg
gaatccatcagcggaaaacccataaattctattgacaacgcaagtctaaataattttttc
aaaaaatacccccatttagacaaattccaattggaggtaactgcactctacaaaaaaaga
aactacaaatccatttggtataatgacggagaacttataaaatttgccaatgaattgtat
tccaagtcggaacaaattgaaaatgaaggactgaaatttgatttggcttacaaagataaa
atggacgccatcttcaacgacgcctctgccgccaaaatcagccaaaccgaaaaagaatta
ttactctctagcctctatatctattatgccaaaaaagtattttatggcatagacactgat
gaaatacatcaaaccggatggttcctgcccagaaaggaactttcttataaaaatttattg
gattccttattggccgaaccggaattactggacaaaaatgaaaaaatactcattggtcaa
tattacaaactacgagctgccttgcaaaaataccgacaaatagaaaaaaataacgattgg
gaatttatagaaaccgaatcacaaatgaagaaatacggccccggagacaacgcaaaaacc
atcagtcaaatcaggcaccggctttttgttctgggcgatttgccccaagactctaaaaac
aatctctatgatgaggagctgaaagccggcattctcaatttcaaaacaagaaacggttat
aaaccggattaccttattggttcccaacacatcaaccgcatgaatcagtctatagaaaaa
tacattcagctcattagcatcaacatggaacgttgccgctggatttctccaaaactggaa
aaagccaatgaatttattgttatcaatatcccctcttttcaattattctatatcaaaaac
ggggaaaatgtattaagctctagagtatttgtaggcatcaatacgatggaaacagtgatt
ttcagctctactatcagcagcattgtgtttagcccttactggaatgtaccgcaaagcatt
ttggaaaacgaaattaaaccggcgatggaaaaagaccctgattatttgaccaaacacgat
ttggaatggaataaaaaaagcctccgacaacgaccaggaccaaaaaacgctttgggagta
gtcaaatttgtctttcccaacacctacagtatttatttgcatgatactccatacaaattg
aatttcaattttgaatttccacgtttcagtcacggctgcattaatatgcaaaaagccaaa
gaactggcctataaaattctagaaaacaatccccaatggcccatagaaaaaataaatgaa
gccatgaacagcggagtagaaacggtctatctgctaaaaaaacccatccccattcacatt
ggctattttacctcttgggcaaatgacgaaggaaaaattaatttctattttgatatctat
actaaagatgatctcctgagcgaatttctttttaatgacaccctaaatttagcggaaacg
actcctgtcaagagactatcaaactaa
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