Flavobacterium acetivorans: LNP19_08150
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Entry
LNP19_08150 CDS
T10181
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fav Flavobacterium acetivorans
Pathway
fav03030
DNA replication
fav03430
Mismatch repair
fav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LNP19_08150
03430 Mismatch repair
LNP19_08150
03440 Homologous recombination
LNP19_08150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fav03032
]
LNP19_08150
03400 DNA repair and recombination proteins [BR:
fav03400
]
LNP19_08150
Enzymes [BR:
fav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LNP19_08150
DNA replication proteins [BR:
fav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LNP19_08150
DNA repair and recombination proteins [BR:
fav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LNP19_08150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
DNA_pol_B_exo1
DNA_pol_B_exo2
Motif
Other DBs
NCBI-ProteinID:
UFH34070
LinkDB
All DBs
Position
1857518..1858288
Genome browser
AA seq
256 aa
AA seq
DB search
MELKLNKPICFFDLETTGIDIGKDRIVEISIFKVFPNGNKESKTWLVNPTIPIPAQTTAV
HGITDEKVANEPTFKELASQVYNMIKDSDLAGFNSDRFDIPLLAEELLRAGVDFDMKNRV
SVDVQTIFHKMEERTLSAALKFYCGKGLENAHSAEADTMATYEILKAQIERYPELENDVK
SLSEFSTRKKIADFAGMIAFDKEDNEIFAFGKHKGVKVDTVLENEPGYFSWIQNADFPLY
TKKVLTAIKLRKLNTK
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggaacttaaattaaataaaccaatctgcttttttgacctcgaaactacgggaattgac
attggaaaagacagaattgttgaaatatcaatatttaaagtttttcctaacggaaataaa
gaaagcaagacgtggttagtaaatcctacgattccaattccggcacaaacaaccgccgtt
catggaattaccgatgaaaaagtagctaatgaacctacttttaaagagttggcttcacag
gtttataatatgattaaggatagtgatttggctggttttaattcagatcgctttgatatc
ccattattggcagaagaattgcttcgtgccggcgtggatttcgatatgaaaaacagggtt
tcggtagatgttcagactatttttcataaaatggaagagcgtactttgtctgctgcgctt
aaattttactgcggtaaaggattagagaatgctcattctgctgaagcggatactatggca
acctatgaaatattaaaagcacaaattgagcgttatccagaattggagaatgatgttaaa
tcattgtcggaattttcgacgagaaaaaaaatcgccgattttgcaggcatgatcgctttt
gataaagaggataatgaaatttttgcttttgggaagcataaaggagtaaaggtggatacg
gttttagaaaacgaaccgggttattttagttggatacaaaatgcagatttccctttgtat
accaagaaagtattgactgcaatcaaattaagaaaattgaatacgaaataa
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