Flavobacterium acetivorans: LNP19_08280
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Entry
LNP19_08280 CDS
T10181
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fav Flavobacterium acetivorans
Brite
KEGG Orthology (KO) [BR:
fav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fav03009
]
LNP19_08280 (rimO)
Enzymes [BR:
fav01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LNP19_08280 (rimO)
Ribosome biogenesis [BR:
fav03009
]
Prokaryotic type
ribosomal protein modification factors
LNP19_08280 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
DUF5005
Motif
Other DBs
NCBI-ProteinID:
UFH34096
LinkDB
All DBs
Position
complement(1880362..1881675)
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AA seq
437 aa
AA seq
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MRTKSLKKNKINVITLGCSKNIYDSEVLMGQLRASGKEVEHEAPAETEGNIIVINTCGFI
DNAKAESVNMILEYADKKEKGLVDKVFVTGCLSERYRPDLEKEIPNVDQFFGTTELPQLL
KALGADYKHELLGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGKHVSQTIEKLVKEA
EGLAKDGVKELILIAQDLTYYGLDIYKKRNLSELLEALVKVEGIEWIRLHYAFPTGFPMD
VLEIMKREPKICNYIDIPLQHISDSILKSMRRGTTQEKTTKLLKEFRAAVPGMAIRTTLI
VGYPGETQEDFNILKDFVQEMKFDRMGCFAYSHEENTHAYLLEDDVPDHVKQERANEIME
LQSQISWDLNQEKVGQVFKCIIDRKEGGHFVGRTEFDSPDVDNEVLIDASKHYLKTGDFA
MIKIIEATEFDLYGEPV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaagtctttaaaaaagaataaaatcaatgtgatcactcttgggtgttctaaa
aacatatacgatagcgaagtactaatggggcaacttcgtgccagcggaaaagaagtggaa
catgaagcaccagccgaaaccgagggaaacattattgtcatcaatacctgcggatttatt
gataatgccaaggctgaatcagtaaacatgatattagaatatgccgataaaaaagaaaaa
ggactggttgacaaagtttttgtaaccggatgtctatccgaaagatacagacctgattta
gaaaaagaaataccaaatgtagatcagttttttggaaccaccgagttacctcaattactg
aaagctttgggtgctgattacaagcacgaattacttggagaacgtttaacaacgactcca
aaaaattatgcgtatttaaaaatcgccgaaggttgtgacagaccttgcagtttttgcgct
attccgttaatgagaggaaaacacgtttctcaaaccatcgaaaaactggttaaagaagct
gaaggattagccaaagatggtgtaaaagaattgattttaatcgcacaagatttaacttat
tacggtcttgacatttacaaaaaacgcaatcttagtgaattattagaagctttggttaaa
gtagaaggaattgaatggattcgtttacactatgccttccctaccggtttcccaatggac
gttttggagattatgaaacgcgaacctaagatttgtaattatattgatattccgttgcaa
cacatttcggattctatcctgaaatcaatgcgacgcggaacaacccaagaaaaaacaacc
aaattactaaaagaattccgtgcggctgttcctggaatggcaattcgtactactttaata
gtaggttatccgggagaaactcaggaagattttaatattttgaaagattttgttcaagaa
atgaagtttgacagaatgggttgttttgcctattcacacgaagaaaacacacatgcttat
ttattagaagatgatgttccggatcatgtaaaacaagaacgtgctaatgaaatcatggaa
ttacaatcgcaaatttcatgggatttgaaccaagaaaaagtaggacaagttttcaaatgt
attatagacagaaaagaaggcggtcattttgtgggaagaacagaatttgatagtcctgat
gtagataatgaagttttgatagatgcttcaaaacattatctaaaaacaggtgattttgcc
atgataaaaattattgaggcaacagaatttgacttgtacggagagccagtttaa
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