Flavobacterium acetivorans: LNP19_09425
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Entry
LNP19_09425 CDS
T10181
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
fav Flavobacterium acetivorans
Brite
KEGG Orthology (KO) [BR:
fav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fav02000
]
LNP19_09425
Transporters [BR:
fav02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LNP19_09425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
UFH34320
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All DBs
Position
2138171..2140063
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AA seq
630 aa
AA seq
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MKKQIKYIVLILIASMHFSCEKDYLDVVPDNIATIDNAFSNRYNAKKFLYTLYMAIPAPG
DRNNPALNGVDEIWYPKSEDGLTGARIAQGFQNVTGPYGDKWLGQGNAALYVGIRNCNIF
LSKIDGVQGLSDYEKKEWKAEANFLKAYYHFYLVSMYGPVVINDEAVAINESTSNVKAVR
NTIDESFTYIVGLLDKAIVDLPVILQTPSEDVGRITKPVAAAIKARVLVTYASPLFNGNS
VYSDFVNKEGLNFFPMQYDATKWEKAAVAAKEAIDICHEAGIRLHEKSDYLNSFPQNDIT
LLRASLRGRVTEKWNSEIIWGHTANTANIQSEAMPRLYSYLTNPVASRHCAPIGIAEMYY
SRNGVPIEEDVNFDYSNRFKTRVATTNDKYDVGEGDITAVLNFNREDRFYADLAFDRAVW
FGNGKETTDTDPWIIRARRGEFASVFEISQYSVTGYWPKKLIAMSTQVKNGNELSTKRYS
FPIIRLADLYLYYAEALNESRGTPDASVYEYIDLVRQRAGLQSVVTSWATSSTNPSKPLT
KSGMRDIIQHERMIEMAFEGNRFWDLRRWKLAKQYMSKPIKGWNVLENSVDNYYTVKTLF
NPTFSERDYFWPIPENEIIRNPSLIQNPGW
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacaaataaaatatattgtattaattttaatagcaagtatgcatttctcttgc
gaaaaagattatttagatgttgttcctgataacatagcaactatagacaatgccttttca
aacaggtataatgcaaagaaatttttgtacacattgtatatggcgatcccagctcctgga
gaccgtaataatcctgcattaaacggagttgatgaaatatggtatcctaagtcagaagat
ggtctaacaggagccagaattgctcaaggctttcagaatgtaactggtccttatggcgat
aaatggttgggacaaggcaatgctgccttatacgttggaattcgtaactgtaatattttc
ttgagcaagatagatggagttcaaggattaagtgattatgagaagaaagaatggaaggcg
gaggctaacttcttaaaagcatactaccacttttatttggttagcatgtatggaccagta
gtgatcaatgatgaggcggtagcaatcaatgaatctacaagtaatgtgaaagcggttaga
aatacaatagacgagtcttttacttatattgtcgggttgttagacaaagctatagttgat
ttgcctgtaattttgcaaactccaagtgaagatgttggaagaattacaaaaccagttgcg
gccgcaattaaggcaagagttttagttacttatgctagtccattattcaatgggaatagt
gtttatagcgattttgtaaacaaagaagggcttaatttctttccaatgcaatacgatgcg
accaaatgggaaaaagcagcagttgctgcaaaggaagcgattgatatctgtcatgaagca
ggaataagattacatgaaaaatcggattatctaaactctttcccacaaaatgatattact
ttattaagggcttctttgagaggaagagtaacagaaaaatggaattctgaaattatatgg
ggacatactgctaatactgcaaatattcagtctgaggcaatgcctcgtttgtacagttat
ctaacaaatcctgttgcttcaagacattgtgctccgataggaattgctgagatgtattat
tctagaaatggagtacctatagaagaggatgttaattttgattacagcaatagatttaag
actagggttgctacaacaaatgacaaatatgatgttggtgaaggagatataactgcagtt
ttaaattttaaccgtgaagaccgtttttatgcagatttagcttttgatagagctgtttgg
tttgggaatggaaaagaaactactgatactgatccttggattattcgtgccagaagagga
gaatttgcttctgtttttgagatttctcaatattctgtaacaggttattggcctaaaaag
ttaatagccatgagtacgcaggtgaagaacggaaatgaattgtctactaaaagatattct
tttcctattatccgtctagctgatttgtatttatactatgcagaggctttaaatgaatct
agaggaacacctgatgcttccgtttatgaatatatagatttagtgcgtcaaagagcagga
ttacaatctgtagtaactagctgggcgacttcgtcaactaatccatcaaaaccattaaca
aaaagtggaatgagagatattattcagcacgaaagaatgattgaaatggcatttgaagga
aatagattttgggatttgagaagatggaaattggcaaaacaatatatgagtaaacctatt
aaaggatggaatgttttagaaaatagtgttgacaattattatacggttaaaacattgttt
aatccaacattttcagagagagactatttctggccaattccagaaaatgaaataataaga
aacccgagcttgatccagaaccctggatggtaa
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