Flavobacterium acetivorans: LNP19_11045
Help
Entry
LNP19_11045 CDS
T10181
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
fav Flavobacterium acetivorans
Pathway
fav03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
fav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LNP19_11045 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LNP19_11045 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
RsgA_GTPase
nSTAND1
DnaJ_CXXCXGXG
nSTAND3
AAA_22
AAA_14
AAA_15
AAA_21
Viral_helicase1
AAA_18
cobW
Motif
Other DBs
NCBI-ProteinID:
UFH36974
LinkDB
All DBs
Position
complement(2527565..2530396)
Genome browser
AA seq
943 aa
AA seq
DB search
MLDKDNTIEVLGARVHNLKNIDISIPREKLVVITGLSGSGKSSLAFDTIYAEGQRRYVET
FSAYARQFLGGLERPDVDKIDGLSPVIAIEQKTTSKSPRSTVGTITEIYDFLRLLYARAA
DAYSYNTGEKMVSYSDEQIKDLIIEDFNGKRINILAPVIRARKGHYGELFQQIAKQGFLK
VRVNGDILDITPGMKLDRYKTHDIEIVVDRIVIEATPDNEKRLSESINTAMHHGENVLMV
LDQDSNEVRYFSRNLMCPTTGISYQNPEPNLFSFNSPKGACDHCNGLGTVNEINILKIIP
NPKLSIKAGGFAPLGEYKSSWIFKQLEIIGEKYAFKITDPIEKIPEEAMKMILNGGKEKF
TINSKDLGVARDYKIDFEGIAHFIKNQHDESGSTTIKRWAKEFMDEISCPVCEGSRLKKE
ALFFKINEKNIAELCNMDISDLTAWFKKLNSQLSDKQKRIATEVIKEIKDRLDFLMNVGL
DYLALSRSSKSLSGGEAQRIRLATQIGSQLVGVLYILDEPSIGLHQRDNEKLIHSLEQLR
DIGNSVIVVEHDKDMIERADYVIDIGPKAGKFGGEIISKGTPAEILASHSMTAQYLNGEM
KIEIPAKRREGNGKFLKLTGATGNNLKNISIELPLGKMICVTGVSGSGKSTLINETLYPI
LNAYYFNGVKKPQPYKKIEGLEHIDKVIDIDQSPIGRTPRSNPATYTEVFTEIRALFTKT
PESMIRGYKAGRFSFNVKGGRCETCEGSGVRTIEMNFLPDVYVECETCQGKRFNRETLEI
RYKGKSISDVLNMTVDEAVPFFEMIPKIYRKVKSIQDVGLGYITLGQQSTTLSGGEAQRI
KLAGELSKKDTGNTFYILDEPTTGLHFEDIRVLMDVINKLVDKGNTILIIEHNMDVIKLA
DYIIDIGPEGGKGGGQVVAKGTPEEIAKVKKSYTAQFLKKELL
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgttagataaagacaataccatcgaagttctaggcgctcgagttcacaacctaaaaaac
atagatatttccattcctcgcgaaaaattggtagtgattaccggtctttcgggttctgga
aaatcatctttggcatttgataccatctatgctgaaggacaacgccgttatgtagaaact
ttttcggcttatgccagacaatttcttggcggactcgaacgcccggatgtggataaaata
gacggactttcgcccgttatcgctatcgaacaaaaaacaacttccaaaagtccgcgttct
accgtaggaacgattaccgaaatatacgactttctgcgtttgctttatgcgcgcgccgca
gatgcttacagctacaatacgggagaaaaaatggtcagttattctgatgaacaaatcaaa
gatcttatcatagaggatttcaacggaaaacgcatcaatattctggctccggttattaga
gcccgaaaaggacattatggcgaattattccaacaaattgccaagcaaggtttcctgaaa
gtgcgtgtcaatggtgatattctcgatattacgcccggaatgaaactggatcgttataaa
acccacgatatcgaaattgtggtagatcgaattgttattgaagctactcctgataatgaa
aaaagattgtccgaaagcatcaacacggcgatgcatcacggagaaaatgtattgatggtt
ttggatcaagattcgaacgaagtgcgttatttcagtagaaacttaatgtgtcccacaacc
ggaatttcgtaccaaaatccggaaccgaatttattttcattcaactctccaaaaggagcc
tgcgatcattgcaacggtctgggaacagtgaacgaaatcaatatcctaaagattatcccc
aatcctaaactatccataaaagcgggcggttttgcgcctttgggcgaatacaaatcttct
tggattttcaagcaattggaaattattggcgaaaaatacgcttttaaaatcaccgacccc
attgagaaaattcccgaagaagccatgaaaatgattttgaacggcggtaaggaaaaattc
actataaattcgaaagatctgggcgttgcccgcgattataaaatagattttgaaggtatt
gcccattttatcaaaaaccaacacgacgaaagcggttccacaacaattaaacgttgggca
aaggaattcatggacgaaatatcctgtcctgtttgtgaaggttcgcgattaaaaaaagaa
gcattattctttaaaatcaatgaaaaaaatattgccgaattgtgcaatatggatatttct
gatttgacagcttggttcaaaaaactgaacagccaattatccgataaacaaaaacgaatc
gcgaccgaagttatcaaagagatcaaagaccgattggactttctgatgaatgttggattg
gattatttggctttaagccgaagctccaagtcgctttccggaggagaagcccaacgcatt
cgattagcgacccagattggttcgcagctggtgggtgttttgtatattttggacgaaccc
agtatcggtttacaccaaagagacaatgaaaaattgatccattctttggaacaattgcgt
gatattgggaactcagtaatcgtggtagaacacgataaagacatgattgagcgcgccgat
tatgtgattgatattggaccaaaggcagggaaatttggtggtgaaatcatcagcaaagga
actccagccgaaattctggcatcgcattcgatgacagcccaatatcttaacggcgaaatg
aaaattgaaatcccggcaaaacgtcgtgaaggcaatgggaaattcctaaagttgactgga
gcaacaggaaataacctcaaaaatatatcgattgaattgcctttgggcaaaatgatttgc
gtgacgggagtttcaggaagcggaaaatcgacgctgattaatgaaacgctctaccctatt
ttgaacgcctactattttaatggtgtcaaaaagcctcagccttataaaaaaattgaaggc
ctggaacatattgataaagtgattgacattgaccaaagtccgataggtagaacgccacgc
tctaatccggctacttataccgaagtttttaccgaaatcagagctttgtttaccaagact
cctgagagtatgattcgcggttataaggcgggacgtttcagttttaatgtcaaaggcgga
cgctgtgaaacctgtgaaggttcaggagtacgaaccatagaaatgaattttttaccggat
gtgtatgtcgaatgtgaaacttgccaaggcaaacgtttcaacagggaaactctggaaatc
aggtacaaaggaaaatccatttcggatgtcttgaacatgacggtagacgaagccgttccg
ttctttgaaatgattccgaagatctacagaaaagtaaaatccattcaggatgtaggttta
ggctatatcacattgggacaacaaagtacaaccctttcgggtggagaagcacaacgaata
aaattagccggagaattatctaagaaagataccggaaataccttttatattttggacgaa
cccacaacaggtttgcattttgaggacattcgagtattgatggacgtgattaacaaactg
gttgacaaagggaatacaatattgattatcgaacacaatatggatgtaatcaaactggcc
gattacattatcgacattggccccgaaggaggaaaaggcggcggacaagttgtcgccaaa
ggaactccagaggaaattgcaaaagttaaaaagagttatacagcgcagtttttgaaaaaa
gagttactttag
DBGET
integrated database retrieval system
