Flavobacterium acetivorans: LNP19_12445
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Entry
LNP19_12445 CDS
T10181
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
fav Flavobacterium acetivorans
Brite
KEGG Orthology (KO) [BR:
fav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fav02000
]
LNP19_12445
Transporters [BR:
fav02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LNP19_12445
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
TPR_12
DO-GTPase2
TPR_14
TPR_6
Motif
Other DBs
NCBI-ProteinID:
UFH34894
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All DBs
Position
2864041..2865807
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AA seq
588 aa
AA seq
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MKFNIIGLMLVLVSIISTSCSLEEDPKYSLNSATVFNDESTAEAVIMQNYGWLASSALYG
QFIHEITIANGIYWSKTDGDRLEKSIKYDYYQEHPLLNSMWTGFYRVISEGTYLAKGLEA
SSLPPAYKTRGIAHARFLRGFAYFQLANLFGKAAIITEPLSSTNLHTALSTRAQVYDQAL
SDLVFAAENLPAIESMKGLATKDAANAFIAKCYWMMANQSQAEGKDATALYTLAKTYGDK
AIGKFTLAPKFADLWVSHSNSTESIFQINFTDAIGVNLRTSFNFGPTAGSFGRIAAAQPS
FGNIKIDRAFYDLHRGTYPDDPRMASTYLSRWVNNTSAATQNQTYFAYPLYNTGTATAPV
VYDMYASAPRKSGDSPTNPDYDFATGTSLPNGLRALWNNTSAGDRNINPLNHKMLSTVMA
NAQYDPKNLIIFRYADLLLLMADVENELGNSGQALSYLNQVLDRARNSVAGAIYPQVQTA
LSKDAMRDKIFFERMFELAGEPNLFEDIRRRGTAYLKKVMEIHNNSKNVQYRYNLETSNS
VGGLYRDYIINNGVLTEDFLKKNLLLPIPLDEINNNDKVFPEDQNFGY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcaatataatcggcttaatgcttgttttggtgtccattatcagcacctcctgt
tctttagaagaagatccaaaatacagtttaaattcggccactgtttttaacgatgaaagc
actgccgaagcagttatcatgcaaaattacggttggttagccagttcagcgctttacggt
cagtttatacatgaaatcaccatagccaacggaatctattggtcgaaaaccgatggtgat
cgtcttgaaaaatcaatcaaatatgattattaccaagaacatcccctcttgaactcgatg
tggaccggcttttatagagtcatttcagaaggtacctatttagcaaaaggattggaagcg
tccagcctccctccagcctataaaacaagaggaattgcccatgctcgatttttaagagga
tttgcttactttcaattggctaatttgtttgggaaagcagccataattacagaaccgcta
tcgtctaccaacttacacacggccttaagcacaagagctcaggtgtatgatcaggcattg
agtgatttagtatttgcagcagaaaacctacccgcaattgaaagcatgaaaggtttggct
accaaagatgctgccaatgcgtttattgccaaatgttattggatgatggccaaccaatcg
caagcagaaggaaaagacgccactgctttgtatactttggcaaaaacctatggcgataag
gccattggaaaatttacattggctcctaaatttgctgatttatgggttagtcacagtaat
tctacagaatctatattccaaattaattttactgatgctatcggtgtcaatctacgcact
tcgtttaattttggtcctacagctggctcctttggtagaattgcagccgctcagccttct
tttggaaatatcaaaatagacagggccttctatgatttgcatcgcggcacttaccctgac
gatccccgtatggcctctacctatttatcgagatgggtaaacaatacttcggctgcaacg
caaaatcaaacctattttgcttatcctttgtataataccggcacagcgactgcgccagtt
gtgtatgatatgtatgcttcggcgcctcgtaaatctggtgatagcccaactaatccagat
tacgactttgctaccggtactagcctgcctaatggtcttagagctctttggaacaacacc
tctgctggtgatagaaatatcaatccattgaatcataagatgctctccacagtaatggcg
aatgcccagtacgatcctaaaaacttaattatcttccgttatgctgacttgcttttgttg
atggctgatgttgaaaatgaattagggaatagcggccaggcacttagctacctaaaccaa
gttttagatcgtgcccgaaattcagtagcaggagctatttatcctcaagttcaaactgcg
ctgagtaaagatgcgatgcgtgataaaatcttttttgaacgaatgtttgaattggccgga
gagcctaatttgtttgaagatatccgtcgcagaggaacagcttatttgaaaaaagtaatg
gaaattcataacaacagtaaaaatgttcaatacagatacaatcttgaaaccagcaattcc
gttggagggctatacagggattatatcatcaataatggtgttcttactgaagatttctta
aaaaagaatttattgcttccaatacctttagatgagatcaacaataatgacaaagtattt
ccggaagatcaaaattttgggtattaa
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