KEGG   Flavobacterium acetivorans: LNP19_13110
Entry
LNP19_13110       CDS       T10181                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
fav  Flavobacterium acetivorans
Pathway
fav03030  DNA replication
fav03430  Mismatch repair
fav03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LNP19_13110 (dnaX)
   03430 Mismatch repair
    LNP19_13110 (dnaX)
   03440 Homologous recombination
    LNP19_13110 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fav03032]
    LNP19_13110 (dnaX)
   03400 DNA repair and recombination proteins [BR:fav03400]
    LNP19_13110 (dnaX)
Enzymes [BR:fav01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LNP19_13110 (dnaX)
DNA replication proteins [BR:fav03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LNP19_13110 (dnaX)
DNA repair and recombination proteins [BR:fav03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LNP19_13110 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNAX_ATPase_lid AAA_22 AAA_14 RuvB_N AAA_5 Rad17 AAA_30 AAA_16 nSTAND3 ResIII DNA_pol3_gamma3 RCF1-5-like_lid NTPase_1 AAA_24 AAA_7 RNA_helicase DNA_pol3_delta_C AAA_18 NACHT AAA_28 DUF815 Sigma54_activ_2 AAA_assoc_2 Mg_chelatase NPHP3_N GNAT_acetyltr_2 AAA_2 ORC-CDC6-like dNK TsaE
Other DBs
NCBI-ProteinID: UFH35021
LinkDB
Position
3031767..3032852
AA seq 361 aa
MEQFIVSARKYRPQTFNDVVGQKAITNTLLNAIDSNHLASALLFTGPRGVGKTTCARILA
RKINQPGYDDPNEDFAFNVFELDAASNNSVDDIRNLIDQVRIPPQTGKYKVYIIDEVHML
SSAAFNAFLKTLEEPPKHAIFILATTEKHKIIPTILSRCQIFDFKRITVKDAKEHLAEVA
TSQGVIFEDDALHIIAQKADGAMRDALSIFDRVVSYCGTNLTRQAVTENLNVLDFETYIT
ITDLILENKIPDLLLAFNDILAKGFDSHHFVSGLASHFRDLLVSKTPSTLSLLEVGEQAQ
KMYGLQAQKSSADFLLKGIAIANDCDLKYKLSQNQRLLVELCLMQLASITFDGEKKKLTP
L
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggaacagtttatagtatcggctcgtaaataccgcccacaaacctttaatgatgttgtg
ggacaaaaagccatcaccaatactttattgaatgctatagacagcaaccaccttgcttct
gctctattatttaccgggcctcgtggtgttggaaaaacaacttgcgcacgaatattggct
cgtaaaattaaccaaccgggttatgatgatcccaatgaagattttgcttttaatgtcttt
gaactggatgccgcctcaaacaactctgttgatgatattcgaaatctgattgatcaggtt
cgaattccaccccaaaccggaaaatataaagtttatattattgacgaggtccacatgtta
tcttcggcagcatttaatgctttcctaaaaacattagaagaaccgccaaagcatgccatt
tttattttggcaacgaccgaaaaacacaaaatcataccaacgatactttcacgttgtcag
atatttgatttcaaaagaatcaccgttaaagacgccaaagaacacctagccgaagtagcc
actagtcaaggagtaatttttgaagacgacgccttacatattatcgctcaaaaggccgat
ggtgcgatgcgtgatgccttatccatttttgacagagttgtttcctattgcggaacaaat
cttacacgtcaggccgttaccgagaatcttaatgtgctcgattttgagacatacattacg
attacagatttaattcttgaaaataaaatcccagatttgcttttggcattcaatgatatt
ttagccaaaggctttgacagtcatcattttgtttcgggactagcttcgcattttagagat
ttattggtcagcaaaacgccctctaccctttccttattagaagttggagaacaagcccaa
aaaatgtatggcttgcaagctcagaaatccagtgccgattttttattgaaaggtatcgct
attgcaaatgattgtgatctaaaatacaaattaagtcaaaatcaacgcttgcttgttgaa
ctttgcttgatgcaacttgcctctatcacttttgatggagaaaaaaaaaagttgacacct
ttataa

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