Flagellimonas aurea: ABWH94_01125
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Entry
ABWH94_01125 CDS
T11242
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
faw Flagellimonas aurea
Pathway
faw03030
DNA replication
faw03410
Base excision repair
faw03420
Nucleotide excision repair
faw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
faw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABWH94_01125 (polA)
03410 Base excision repair
ABWH94_01125 (polA)
03420 Nucleotide excision repair
ABWH94_01125 (polA)
03440 Homologous recombination
ABWH94_01125 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
faw03032
]
ABWH94_01125 (polA)
03400 DNA repair and recombination proteins [BR:
faw03400
]
ABWH94_01125 (polA)
Enzymes [BR:
faw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABWH94_01125 (polA)
DNA replication proteins [BR:
faw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ABWH94_01125 (polA)
DNA repair and recombination proteins [BR:
faw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ABWH94_01125 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABWH94_01125 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
XHC22502
LinkDB
All DBs
Position
246085..248919
Genome browser
AA seq
944 aa
AA seq
DB search
MSDQKRLFLLDAYALIFRGYYALIKNPRINSKGMDTSAIMGFMNSLFDVIKREQPDHLAV
AFDKGGSVERVEMFEDYKANRDETPDAIRIAVPYIQQILEAMKIPVVELEGYEADDLIGT
LAKQAEKENYKVFMVTPDKDFGQLVSENIFMYRPARMGNGIEIWGIPEVQKRFGVKRPEQ
VIDYLGMMGDASDNIPGLPGVGDKTAKKFIEQFDSMEGLLANTEKLKGKMKEKVEENAEL
GRLSRKLAEIKTDCDVQFHAEDYEMCPPDAEKVQEIFEELEFRRLKDQFIKIFTGEAEAS
TQVTNTKTAKEEAKVAGSGQFTLFGGDPSEAAATIKDVNSRMTIGDVPHFYQNVQDGLGM
ELFMDMLMKQPSVCFDTETTSLNPLEAELVGIAFSWSPGKGFYVPFPDNENDARPLIEKL
RPFFESEAIEKVGQNLKYDIKVMKNYGVEVKGKLFDTMLAHYLINPDMRHNMDVLAETYL
NYTPISITELIGKKGKNQLNMRDVPLEKQTEYAVEDADVTFQLGLKFTPELKDAHTDKLF
SEIEIPLLRVLADMELEGINLDKDYLGGLSEQLDKDIKELEQSIYKEAGEEFNIASPKQL
GDILFDKLKLVDKPKKTKTGQFSTSEDVLSYLAKDHKIIQNVLDYRGLAKLKSTYVDALP
NEVQEKTGRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQVRKAFIPRDENYVLLAA
DYSQIELRIIAALSEEDTMISAFKNGEDIHASTASRVFNVPIDEVTREQRSNAKTVNFGI
IYGVSAFGLSNQTDLSRSEAKELIDTYYKTYPKLRNYMSEQVDFARDNGYVQTVLGRRRY
LKDINAGNQVVRGAAERNAVNAPIQGSAADIIKIAMINIHKKLSEGKYKTKMLLQVHDEL
VFDCYKPELEEMKKLIKSEMENAYKLSVPLDVEVGIGENWLEAH
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccaaaaaagacttttcctactagacgcctacgcgcttatttttcgcggctac
tacgccctcatcaaaaacccaagaatcaattccaagggaatggacacctctgccattatg
ggatttatgaattccctttttgatgtgatcaaacgcgaacagcccgaccatttggcggtt
gcttttgataaaggaggcagcgtggaacgtgtggaaatgttcgaggactataaagcaaac
cgtgatgaaacacccgatgccattcgtatcgccgtgccctacatccaacaaattttggag
gccatgaaaattcccgtggtggaattggagggttacgaagcggatgaccttatcggtacc
ttggccaaacaggccgaaaaggaaaattacaaggtgtttatggtcacacccgacaaggat
tttggtcagttggtgagcgaaaacatttttatgtaccgccccgcccgaatgggcaacggt
atcgaaatttggggcatccccgaagtacagaaacgtttcggtgttaagcgtcccgaacag
gtaatcgattatttggggatgatgggagatgccagtgacaatattccaggactcccaggt
gtaggcgacaaaacggccaaaaaatttattgagcagttcgattccatggaaggtttgttg
gccaataccgaaaagctcaagggcaagatgaaggagaaggtggaagagaatgccgagttg
ggacgattgtccagaaaattggcagagatcaaaacggattgcgatgtacaattccatgcg
gaggattacgaaatgtgtccgcccgatgccgaaaaagtccaagagatttttgaagaactt
gaattccgcagactgaaagaccaattcatcaaaatatttacgggcgaggcggaagccagt
acccaagtgaccaataccaaaacggccaaagaagaagccaaagtggcgggaagcggtcag
tttaccctatttggcggtgacccttccgaagcggcggccaccatcaaagatgtgaacagc
cgaatgacgattggcgatgtgccccatttttatcagaatgtgcaagatggtctgggcatg
gaactttttatggacatgctgatgaaacaaccttcggtatgttttgatacggagaccacg
tccctcaatccgttggaagccgaattggtcgggattgcctttagttggtcgccaggcaaa
gggttttatgtgcccttcccagacaatgagaacgatgcaagacctttgattgaaaaactg
cgtccgttttttgaatccgaagccattgaaaaagtgggacaaaacctcaagtacgatatc
aaagtgatgaaaaactacggcgtagaggtcaagggcaaactgttcgataccatgctggcc
cactacctcatcaaccccgatatgcgccataatatggacgtattggcagaaacgtacctc
aactatacgcccatttccataacagagctcattggcaaaaaaggcaaaaatcagctcaat
atgcgggacgttcctttggaaaaacaaacggaatatgcggtggaagatgccgatgttaca
tttcaattggggctaaaatttacgccagagctcaaagatgcccatacggataaactgttc
tctgaaattgaaatcccgttgcttcgcgtgttggcggatatggaattggaaggcatcaat
ctggacaaggattatctgggcggactttcggagcagttggacaaggacatcaaggaactg
gagcaaagtatttataaagaagcgggcgaggaattcaacattgcctctcccaaacaattg
ggggacatcctatttgataagctcaagctggtggacaaacccaaaaaaaccaaaacgggc
cagttttccacttcggaagatgtgctctcctacttggccaaggaccacaaaatcatccaa
aacgtgttggactaccgtggattggccaagctaaaaagcacttacgtggatgccctgccg
aacgaggttcaggaaaaaacaggccgcgtacataccgattatatgcaaaccgttgccgct
acgggccgtttgagcagcaacaacccgaaccttcagaatatacccatccgaaccgaacgt
ggcagacaggtgcggaaggcctttatcccacgggatgaaaactatgtgctcttggctgcg
gattactcacagatagagttgcgtattattgccgccttgagcgaagaggacaccatgatc
tccgcttttaaaaatggagaggatattcacgcttccactgcatccagggtttttaacgta
ccgattgacgaagtgacccgcgaacagcgtagcaatgccaaaacggtcaacttcgggatc
atttacggggtgtctgcttttggattgagcaaccaaacagatttgagccgttcagaggcg
aaggaacttattgatacctattacaagacctaccccaagttgcgcaattacatgagcgaa
caggtcgattttgcccgtgataatggctatgtgcaaacggtgttgggccgtcgcaggtat
ttaaaggacattaatgcggggaaccaagtggtgcgcggggctgcggaacgaaacgcggtg
aacgcccccattcaggggagtgctgcggacatcatcaagattgcgatgatcaacatccat
aaaaagctttccgaaggtaaatacaagaccaaaatgttgttgcaggtacatgatgaattg
gtgttcgattgctacaagcccgaactggaggaaatgaaaaagctcatcaagtccgaaatg
gaaaacgcctataagctgtccgttcctttggatgtggaagtgggtatcggtgagaattgg
ttggaggcgcattga
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