Flagellimonas aurea: ABWH94_05560
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Entry
ABWH94_05560 CDS
T11242
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
faw Flagellimonas aurea
Brite
KEGG Orthology (KO) [BR:
faw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
faw03016
]
ABWH94_05560 (truB)
Enzymes [BR:
faw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ABWH94_05560 (truB)
Transfer RNA biogenesis [BR:
faw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ABWH94_05560 (truB)
Prokaryotic type
ABWH94_05560 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
SAM_PNT
Motif
Other DBs
NCBI-ProteinID:
XHC23359
LinkDB
All DBs
Position
complement(1225727..1226431)
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AA seq
234 aa
AA seq
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MNTKEDFLNGQILLIDKPLEWTSFQAVNALKWAIRKKFSLKKIKIGHAGTLDPLATGLLI
ICTGKFTKKIPELQGQAKEYTGTFTLGATTPSYDLETEVNETFPIDHITDASIKDATTQF
LGEIDQVPPIFSALKKDGKRLYELAREGKEVEIKSRKIEISEFEITRIDLPEVDFRVVCS
KGTYIRSLAHDFGKALGSGAYLSELRRTKIGDFNVNNATSPNVFKENLEVNAST
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaccaaagaagattttttaaacggtcagattcttttgatcgacaaaccgttggaa
tggacttccttccaagccgtgaatgcgctcaaatgggccattcgtaaaaaattcagtctt
aaaaagataaaaatcggtcatgcgggaacgttggatccattggccacaggcctgttgatt
atctgcacagggaaattcaccaaaaaaattccagagcttcagggacaggcaaaagaatac
acaggtaccttcacgttgggagctactacaccttcttatgatctggagaccgaagtgaac
gagacctttcccatcgatcacattacagatgcatccataaaagatgccacaacacaattc
ttgggtgaaattgaccaagtgcctcccattttttcagccttaaaaaaagatggaaagcgg
ttgtacgaacttgcccgcgaagggaaagaagtggaaataaaatcacgaaaaatagaaata
tccgagtttgaaattacccgaatagacctgcctgaagtggattttagggtagtgtgcagc
aaagggacctatatccgttccctggcgcacgattttggcaaggcattgggttctggagcc
tatttatccgagctccgaagaaccaaaataggtgatttcaacgtaaataatgctacaagc
cccaatgttttcaaggaaaaccttgaagtaaacgcttcaacctaa
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