Flagellimonas aurea: ABWH94_09575
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Entry
ABWH94_09575 CDS
T11242
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
faw Flagellimonas aurea
Pathway
faw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
faw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABWH94_09575 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
faw03019
]
ABWH94_09575 (recQ)
03400 DNA repair and recombination proteins [BR:
faw03400
]
ABWH94_09575 (recQ)
Enzymes [BR:
faw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABWH94_09575 (recQ)
Messenger RNA biogenesis [BR:
faw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABWH94_09575 (recQ)
DNA repair and recombination proteins [BR:
faw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ABWH94_09575 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Motif
Other DBs
NCBI-ProteinID:
XHC24132
LinkDB
All DBs
Position
2117334..2119535
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AA seq
733 aa
AA seq
DB search
MSLMNTDLHSSLKKYFGFSKFKGLQEGVIQNILSDNDTFVIMPTGGGKSLCYQLPAIMKE
GTAIVVSPLIALMKNQVDAIRGISEQHGIAHVLNSSLTKTEVKQVKEDITNGVTKLLYVA
PESLTKEENVEFLKKVKLSFVAVDEAHCISEWGHDFRPEYRNLRGIINRLGDNIPIIGLT
ATATPKVQEDIIKNLGMTDAKVFKASFNRPNLFYEVRPKTKDVDADIIRFVKQNQGKSGI
IYCLSRKRVEELAQVLQVNGVSAVPYHAGFDAKTRSKYQDMFLMEEVDVVVATIAFGMGI
DKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGHCLAYYAYKDVEKLEKFMSGKPVAEQ
EIGNALLQEIVAYAETSISRRKFILHYFGEDFDEENGEGADMDDNSRNPKPKEEAKDDVV
KLLTVVRDTKEKFKTKEIVRVLVGKTNAMISSHKTDEKSFFGIGKDKDKEFWMALTRQVL
VAGLLKKEIERYGILNLTESGKEYLKNPESFMMTKDHVYSKDDTGNIVTAEKSNGAVADE
HLLKLLRDLRKREAQKHEVPPFVVFQDPSLEDMSLKYPITMNELLNIQGVGEGKAKKYGK
AFVELISKYVEENDIVRPDDLVVKSTGANSALKLYVIQSVDRKLPLDDIASAKGLELPEL
IKEMEQIVFSGTKLNIGYWIDEILDEDQQEEIHDYFLEADTDSISAAIDEFDGDYEDEEL
RLYRLKFISEVAN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgagcctaatgaatactgatttacattcctcgctcaaaaaatattttggtttctcgaag
ttcaaaggattacaggaaggtgtaatccagaatatccttagtgataacgatacgtttgtg
attatgcccacgggaggtgggaaatccctgtgctatcaactgccagcgataatgaaagag
ggtaccgctattgtggtgtctcctttgattgcgttgatgaaaaaccaagtggacgccatt
cgtggcatatccgagcagcatggtattgcccatgtgttgaactcctcattgacgaaaacc
gaggtgaagcaggtaaaggaagatattactaacggagtgaccaagttactttatgtggca
cccgaatccttgacgaaggaggaaaatgttgagtttctaaaaaaagtaaaactttccttt
gttgctgtggatgaagcccactgtatttcggaatgggggcacgattttaggcccgaatac
cgaaatctccgaggtattatcaatcgtttaggagacaatattcctattattggccttaca
gcaactgctacgccgaaggtgcaggaagacattatcaaaaacttgggaatgacggatgcc
aaggtgttcaaggcgtcgttcaataggcctaatttgttttatgaggtgcgtccgaaaacc
aaagatgtagatgcggatatcatccgttttgtgaagcaaaatcaaggaaaatcgggaatc
atctattgcttgagccgcaaaagagtggaagaattggcccaagtgctccaagtaaatggg
gtgagtgccgttccgtatcatgcaggttttgatgcaaagacccgctccaaatatcaggat
atgttcttgatggaggaggtagatgtggtggtggccaccattgcttttggtatggggata
gacaagccggatgtacgttttgttatccaccacgatattcccaagagtattgaaagttat
tatcaagaaactggccgtgcagggcgagatggcggagaagggcattgcttggcctattac
gcatacaaggatgtggagaagttggagaaattcatgtctggaaaacccgttgcggagcaa
gaaattggtaatgcgctcttacaggaaattgtagcctatgccgaaacatccatatcccgt
agaaaatttatactgcactatttcggtgaggattttgatgaagagaacggagaaggggca
gatatggacgataattccagaaaccccaaacctaaggaagaggccaaggacgatgtcgta
aagcttttgacggtggtacgagataccaaggaaaagttcaagaccaaggaaattgtaagg
gtgttggtcggcaagaccaatgccatgatttcttcgcataagaccgatgagaaaagtttt
tttggaataggtaaggataaggacaaagaattttggatggcgttgaccagacaggttttg
gtggccggactcctaaaaaaagaaattgaacgatatggtattttgaaccttaccgaatca
ggtaaggaatatctcaagaacccagagtcctttatgatgacaaaggaccatgtgtactcc
aaggacgataccggaaacattgtcaccgccgaaaaatcgaatggagcggttgcggacgaa
catttattgaaattgcttcgtgaccttcgcaaaagagaggcacaaaaacatgaagtgcca
ccatttgtagtctttcaagacccgtcgttggaagatatgtccttaaagtatccaattacc
atgaacgaacttctcaatattcaaggggtaggggaaggaaaggcgaaaaaatatgggaag
gcctttgtggagcttatctctaaatatgtagaggaaaacgatattgtaaggccagatgat
cttgtggtgaaaagtaccggtgccaattccgctttaaaactttacgtgatccaaagtgtg
gatagaaagttgcccttggatgatattgcatctgccaaaggattggaattaccggaactt
atcaaggaaatggagcaaattgttttcagcggaaccaaattgaacattggttactggata
gatgaaatattggatgaggaccaacaagaagaaatccatgattactttttggaggccgat
accgattccatatccgctgccattgatgaatttgatggcgactacgaagatgaagaactc
cgtttgtaccgtcttaaatttataagtgaagtggcgaattaa
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