Flagellimonas aurea: ABWH94_12600
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Entry
ABWH94_12600 CDS
T11242
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
faw Flagellimonas aurea
Pathway
faw03030
DNA replication
faw03430
Mismatch repair
faw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
faw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABWH94_12600 (holA)
03430 Mismatch repair
ABWH94_12600 (holA)
03440 Homologous recombination
ABWH94_12600 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
faw03032
]
ABWH94_12600 (holA)
03400 DNA repair and recombination proteins [BR:
faw03400
]
ABWH94_12600 (holA)
Enzymes [BR:
faw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABWH94_12600 (holA)
DNA replication proteins [BR:
faw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABWH94_12600 (holA)
DNA repair and recombination proteins [BR:
faw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABWH94_12600 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
HP_1247_M
DNA_pol3_delta2
Herpes_UL7
Motif
Other DBs
NCBI-ProteinID:
XHC20946
LinkDB
All DBs
Position
2823143..2824144
Genome browser
AA seq
333 aa
AA seq
DB search
MDKVKEIVSEINNGNPKPIYFLMGDEPYYIDRISQYIAENVLTEDEKGFNQMVLYGKDTS
VDDIVANAKRFPMMAQYQVVIVKEAQHLSRTIENLVSYAENPQPTTILVLCYKYKKLDKR
KKLYKAINKSGELFESKKLYDNQVADWIRRTLASKKYKISPKACVMLVEYLGTDLSKISN
ELDKLTLIVPPTKEITPELIEEHIGISKDFNNFELKKAIGERDVKKASRIIDYFAQNPKD
NPFVVTVTLLNTFFTQLLQYHGLKDHSPGNVAKVLGVNPYFVNEYVVAAKNYPMKRVSGI
ISSLRNLDLKGKGVGASNMGQADLLKELLSEII
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagtaaaggagattgtatcggaaatcaacaatggaaatccaaaacctatatat
tttttaatgggggatgagccctattatattgataggatttctcaatatattgccgaaaat
gtactcacggaagatgagaaaggctttaatcaaatggtattgtacggtaaggacacctct
gtggatgacatagttgcgaacgccaagcgatttcctatgatggcccagtaccaagtggta
attgtaaaggaagcccaacatttgtcaagaactatcgaaaaccttgtttcttacgctgag
aacccacagccgaccacgattttggtgctttgctacaaatacaagaagttggataagcgt
aaaaaactgtacaaggccattaacaaaagtggcgagctgttcgaaagcaaaaaactctac
gataatcaagtggcggattggattcgaaggaccttggcgagtaaaaagtacaagatttcc
cccaaagcctgtgtaatgctggtggagtatcttggaactgatttgagcaaaatcagcaac
gaacttgataaattgactttgattgtgccacctaccaaggaaattactcccgagctgata
gaggaacatattgggataagcaaagacttcaataattttgagctgaaaaaagcgattggg
gagcgtgatgttaaaaaggcatcacgaatcattgattatttcgcacagaacccaaaggac
aatccctttgtggttacggttacgctactgaacacctttttcacccaacttttgcaatat
catggactcaaggaccattctccaggaaatgtggccaaggtacttggcgttaatccttat
tttgtaaacgagtatgtagtggccgcaaaaaattacccgatgaaaagagtgagcggcatt
atttccagcttaaggaatttagatctaaaggggaaaggagtaggtgccagcaatatggga
caggccgatttgctgaaagaactactatccgaaataatctaa
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