Flagellimonas aurea: ABWH94_13195
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Entry
ABWH94_13195 CDS
T11242
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
faw Flagellimonas aurea
Pathway
faw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
faw00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ABWH94_13195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
faw03021
]
ABWH94_13195
Transcription machinery [BR:
faw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABWH94_13195
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
PgaD
HTH_20
Motif
Other DBs
NCBI-ProteinID:
XHC21059
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Position
2953750..2954613
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AA seq
287 aa
AA seq
DB search
MRQLKIIKQVTNRESKSLDKYLQDISKIDLITAQEEVELAQKIRAGDQAALEKLTNANLR
FVVSVAKQYQNQGLKLPDLINEGNVGLVKAAKRFDETRGFKFISYAVWWIRQSILQALAE
QSRVVRLPLNKIGSINKIKKTFSYLEQAHERPPSPEEIAKELDMTVSEVKQSLKNTGRHV
SMDAPLKEGETSNLYDVLNAGDSPKPDKGLMHQSLNTEINRALDTLSPREADVVRLYYGI
GDQPSMTLEEIGSTFDLTRERVRQIREKAIRKLRHTSKSKILKSYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagctaaaaatcatcaaacaggtcacgaaccgggaatccaaatcacttgacaaa
tacttgcaggatatcagtaaaatcgatttgatcaccgcgcaggaagaagttgagctagca
cagaagatcagggccggtgaccaagctgctttggaaaaattgaccaatgcaaacctaagg
tttgtggtgtccgttgcaaaacagtaccaaaaccaagggctaaagctcccggatttgata
aacgaaggaaacgttggattggtaaaagcagccaaacgttttgatgaaacccgcgggttt
aaatttatttcctatgctgtttggtggattcgccagtccattctacaagctttggcggag
cagtcccgtgttgtacgtttgccattgaacaaaatcgggtcaataaataaaataaaaaag
acattttcctatctagagcaagcccatgaacgtccgccgtccccagaggagattgccaaa
gaattggacatgacggtttccgaggtgaagcaatcattgaaaaatacaggtagacatgta
tctatggatgcgccattaaaggaaggtgaaacttccaatctatacgatgttcttaatgcc
ggagattccccaaaacctgacaaagggctgatgcatcagtctctgaacacagaaataaac
agggctttggatacattgtcgccaagagaggccgatgtggtacgcctgtattacggtata
ggtgaccaaccatccatgaccttggaggaaattggaagcactttcgatttgaccagggaa
cgtgtacgccagattcgggagaaggccattcgaaaattacggcatacatcaaaaagtaaa
attttgaagtcctatcttggataa
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