KEGG   Fulvitalea axinellae: FUAX_01030
Entry
FUAX_01030        CDS       T09748                                 
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
fax  Fulvitalea axinellae
Pathway
fax02020  Two-component system
fax02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:fax00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FUAX_01030
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    FUAX_01030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fax03021]
    FUAX_01030
Transcription machinery [BR:fax03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     FUAX_01030
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_12 Ribonuc_red_sm LacI SF3b1 HTH_IclR MarR
Other DBs
NCBI-ProteinID: BDD07671
UniProt: A0AAU9C6L7
LinkDB
Position
143620..145071
AA seq 483 aa
MQKLELTQSLGQKLSPQQIQFIKLLQVPTAELETRIEEELEVNPALEEGREEEKAEAKEE
KTEEYEETPKDEDLELGDYLHDDFSGYKMYGDGNGSSMEEEDREMPIATSVSLNDQMKDQ
LGYLRLSDRDNILAEQLIGSIEGDGYIRRDLGAIANDLMFAQGVEATEDELAVILDKIQQ
FDPPGIAARDLRECLLLQLERKGSDDPMVANAIRIVRDCYNDFTKKHYEKISKKLGLDVE
DELKPAFELITKLNPKPGGTAEGLVKTQFLVPDFILHNNNGRLELTLNSRNAPELRVNRT
YSEMMDTYDKSKRKDKKLRETVSFVKQKLDAAKWFIDAIKQRQQTLLNTMNAIVQYQYDF
FLEGDESKLRPMILKDIANEIGMDISTVSRVANSKAVQTEFGIYLLKYFFSEGIATDSGQ
DVSSREVKYTLRRLIEHEDKRKPLSDDKLEKLLRAKGYNIARRTVAKYREQMNIPVARLR
KEL
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgcagaaattagaattaacccaaagtctaggccagaagctgtcgccacaacagatccag
tttatcaagctgctacaggtgccgaccgccgagctcgaaacaagaattgaagaggagctg
gaagtaaaccccgcgcttgaggaagggcgagaggaagaaaaagccgaagccaaggaagaa
aaaaccgaggaatacgaggaaacgccgaaagacgaggacttggagctcggtgattatctg
catgacgatttcagcggatacaaaatgtacggcgacggaaacggctcctcgatggaggaa
gaggaccgggagatgccgatagccaccagcgtatcgctcaacgaccagatgaaagaccag
cttggctaccttaggctaagcgacagggacaacatcttagcggaacaactgatcggaagt
atcgagggcgacggctatatccgcagggatttgggcgctattgccaacgatctgatgttt
gctcagggcgtggaagccaccgaagacgagcttgcggtgattttggacaagatccagcag
tttgacccgccgggtatcgccgcccgtgacttgagggagtgtctgttgttgcagttggag
cgcaaaggcagtgacgatccgatggtggcgaacgcaatcaggattgtcagggattgctac
aatgattttacgaagaagcattacgaaaagataagcaagaagctgggcttggatgtggaa
gatgagctgaagccggcctttgagctaatcacgaagttgaatccgaagccgggcggaacg
gccgaaggtttggtgaagactcagtttttggttccggattttatcctgcataataataac
ggaaggcttgagctgacactgaattccagaaacgctccggagttgagggtaaaccgtacc
tactccgagatgatggacacttacgataaaagtaagcgcaaggacaaaaaactgcgggag
acggtgagcttcgtgaagcagaagcttgacgcggccaagtggtttatcgacgccatcaaa
caaaggcaacagactttgctcaatacgatgaacgccattgttcagtatcaatacgatttc
ttcttggaaggtgacgagagcaagttgcgtccgatgattttgaaagatatcgccaacgag
attggaatggatatttccacggtatcgagggtagcgaacagcaaggcggtgcagacggaa
tttgggatttatctgctgaaatacttcttcagcgaaggtatagccaccgattccggtcaa
gacgtaagtagccgggaggtgaagtatacgctccgaaggctgatagagcatgaagataag
cgtaagcctctgtctgacgataaattggaaaaactattgcgggccaagggctataacatc
gcccggcgtaccgtggccaaataccgggaacagatgaatattcccgtggccagactgcgg
aaagagctttag

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