Fulvitalea axinellae: FUAX_12340
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Entry
FUAX_12340 CDS
T09748
Symbol
uvrD
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fax
Fulvitalea axinellae
Pathway
fax03420
Nucleotide excision repair
fax03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FUAX_12340 (uvrD)
03430 Mismatch repair
FUAX_12340 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fax03400
]
FUAX_12340 (uvrD)
Enzymes [BR:
fax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FUAX_12340 (uvrD)
DNA repair and recombination proteins [BR:
fax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FUAX_12340 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
FUAX_12340 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
Sgo0707_N2
AAA_12
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BDD08802
UniProt:
A0AAU9CLI7
LinkDB
All DBs
Position
1510480..1512744
Genome browser
AA seq
754 aa
AA seq
DB search
MLNYLEGLNEPQREGVVNTEGPCMIIAGAGSGKTRVLTMRIAHLIKAHGVDPFSIMALTF
TNKAASEMRERIEKEVGQEARNLWMGTFHSIFARILRFECDKLGYPKDFTIYDTDDSKQL
VKQIVKEMGLDDKIYKPNVVFNRISGAKNKLVSWKEYISNPLFKADDESARKPRLGEIYK
TYVQRCFKAGAMDFDDLLFNTNVLFKEHPDVLHKYQHRFRYILVDEFQDTNVSQYLITKK
LAGVHGNICVVGDDAQSIYAFRGAEIENILNFEKDFPDLRTIKLEQNYRSTQHIVDAANG
IIRNNTGQLPKNVWTANPQGESIELIQAASDTEEGRLVASAIFEEKMRKQWRSQDFAVLY
RTNSQSRSLEEALRRMNIKYKIVGGLSFYQRKEIKDVLAYLRFAINPQDEQSFRRIINLP
KRGIGPTSVDKIIMAAGTRYDGSIWEAVCRPAEYLPARAANAVLGFKDMVEAFRYDATRK
DAYEVTRRVAKDTGIIKMLYEDKTVEGLTRYENVQELINAVKEFTDNPEVEDKSLTAFLQ
EVSLLTGVDQDKDDDPDKVTLMTVHMAKGLEFKHVFLVGMEEDLFPSQMMLGSRKDLEEE
RRLFYVAVTRAQSKLTLTFALSRYRFGRLTYGERSRFLDEIGPEHMNLSSRKVHTSTTKP
ASELSFARISAPTKKPTTLGARMAGAKPHKPSEGFAPSDPSKLAVGQKVEHQKFGFGTVE
ALDMDGMNKRAKVAFDKVGSKTLLLSFAKLRILD
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgttgaattatctagaaggactcaacgagccccaacgcgagggtgtcgtgaataccgaa
ggcccgtgcatgattatcgccggagcgggttctggcaaaacgcgggtgctcaccatgcgt
atcgctcacctgataaaagcccacggtgtggatccgttcagtattatggcgctgacgttt
accaacaaggcggcctcggagatgcgcgagcgtattgagaaggaagtggggcaagaggcc
cgcaacctgtggatggggactttccactcgattttcgccagaattctcaggttcgaatgc
gacaagctcggctacccgaaagatttcacgatatacgacaccgacgattccaagcaactg
gtaaaacagattgtgaaggaaatgggtctcgatgacaaaatatacaagcccaacgtagtt
ttcaaccgaatctcgggagcgaaaaacaagctggtttcctggaaggaatatatcagcaac
ccgctcttcaaggcagatgacgaaagtgccagaaaaccgcgtttgggagagatttacaag
acatacgtccagcgttgcttcaaagccggagcgatggatttcgacgatttgctcttcaac
accaacgtgctgttcaaagagcatccggacgttttgcacaaataccagcaccgtttccgc
tatatcttggtggacgagtttcaggataccaacgtttcccaatacctgatcacgaagaaa
ctcgctggcgtacacggcaatatctgcgtagtgggcgacgacgcccagagtatttacgct
ttccgcggtgccgaaatcgagaacatcctcaacttcgagaaagattttcccgatttgaga
accataaagcttgagcagaattaccgttcgactcaacatatcgtggacgccgcaaacgga
attatccgcaacaatacgggacaacttccgaaaaacgtttggacggcgaacccccaaggc
gaatcgatcgagcttatccaagcggcctccgatacagaagagggacgtttggtggcttcg
gcaatcttcgaggagaaaatgcgcaaacagtggcgcagtcaggattttgccgttttgtac
cggaccaatagccaatcgagatcgcttgaagaggctttgcgtcgaatgaatatcaaatac
aaaatcgtaggcggtctttcattctaccaaaggaaagagatcaaggacgttttggcttat
ttgagattcgccatcaacccccaagacgaacagtcattccggagaatcatcaaccttcca
aaacgtggaatcggaccgacttccgtagataagattatcatggcggcgggtacacgttat
gatggaagcatttgggaagcggtatgccggccagccgaatatctgccggcccgcgcggca
aacgccgttttgggtttcaaggatatggtggaagctttccgctacgacgctacccgcaaa
gacgcatacgaagtcacccggagagtggccaaagacacgggtattatcaagatgctttat
gaagacaagacggtagagggcctgacccgttatgagaacgtccaggaattgatcaacgcc
gttaaggaattcaccgacaatccggaagtggaggacaagagccttacggctttccttcag
gaagtgtcgttgttgacgggcgtagaccaagacaaggacgacgatccggacaaagtgacg
ctgatgaccgtccatatggccaaaggtttggagttcaaacacgtctttttggtcgggatg
gaagaggatctttttccttcgcagatgatgctcggaagccggaaagatctggaagaggaa
cgtcgcctgttttatgtggccgtcacccgcgcccagtcgaaattgacattgacattcgct
ctgagtcgttacaggttcggtcgccttacctacggcgaacgtagccgtttcctcgacgaa
atcgggccggaacatatgaatctttcgagcaggaaagtccatacttccaccactaagccg
gcgtcggaactgtcgtttgccagaatttcggccccgacgaaaaagccgacaactttggga
gcccgtatggcgggagcaaagccgcataagccgtcggaaggattcgctcctagcgatccg
tcgaaattggccgtaggccaaaaagtggagcaccagaagttcggattcggaacggtggag
gccttggatatggacggaatgaacaagagggcgaaggtggcgtttgacaaagtcgggtcg
aagaccttgctgttgagcttcgccaagcttaggattttggactga
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integrated database retrieval system
